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Os08g0205200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Equilibrative nucleoside transporter 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0128) R2 : 0.379
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.521 (0.0312) R2dC : 0.381 R2C : 0.379
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00322 (0.0269) R2dN8 : 2.52e-05 R2N8 : -0.00212
σ : 0.242
deviance : 26.66
__
_____
C
peak time of C : 21.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.14 0.231 12.4 -0.75 0.515 -2.22 -0.00311 11.8 0.0191 21.8 1000 230 -- --
25.95 0.239 12.3 0.0207 0.524 -0.147 0.0286 -- 0.0197 21.9 1000 230 -- --
24.14 0.229 12.4 -0.748 0.515 -2.22 -- 11.7 0.0192 21.8 1000 239 -- --
25.37 0.235 12.3 0.0216 0.518 -0.419 -- -- 0.0151 21.8 996.8 732 -- --
39.95 0.294 12.4 -0.807 -- -2.39 -- 12.6 0.0182 -- 1000 246 -- --
26.61 0.242 12.3 0.0428 0.521 -- 0.0359 -- 0.00789 21.9 -- -- -- --
26.62 0.242 12.3 0.0415 0.521 -- -- -- 0.00784 21.9 -- -- -- --
40.86 0.298 12.3 0.0491 -- -0.554 -- -- 0.0157 -- 995.5 807 -- --
25.34 0.234 12.3 -- 0.507 -0.458 -- -- 0.00899 21.8 996.3 801 -- --
42.85 0.306 12.3 0.0472 -- -- -- -- 0.00773 -- -- -- -- --
26.66 0.242 12.3 -- 0.521 -- -- -- 0.00322 21.9 -- -- -- --
40.84 0.298 12.3 -- -- -0.6 -- -- 0.0142 -- 995.5 831 -- --
42.91 0.306 12.3 -- -- -- -- -- 0.0025 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.90 temperature 20 720 > th dose dependent rect. 13 10
6 23.94 wind 9 4320 > th dose dependent rect. 18 20
13 24.00 wind 9 4320 > th dose dependent rect. 20 18
24 24.04 atmosphere 1005 14400 > th dose independent rect. 8 1
25 24.04 atmosphere 1000 270 < th dose independent rect. 11 19
33 24.05 atmosphere 1000 270 < th dose independent rect. 15 15
34 24.05 atmosphere 1000 270 < th dose independent rect. 13 17
39 24.05 temperature 25 720 > th dose dependent sin 14 NA
53 24.08 atmosphere 1000 270 < th dose independent sin 14 NA
54 24.08 atmosphere 1005 14400 < th dose independent rect. 8 1
60 24.09 wind 5 43200 > th dose independent rect. 23 1
61 24.09 wind 7 4320 < th dose independent rect. 19 9
84 24.12 wind 5 43200 < th dose independent rect. 23 1
93 24.14 wind 7 4320 > th dose independent rect. 19 9
100 24.15 temperature 30 720 < th dose dependent rect. 16 3
106 24.17 temperature 25 720 > th dose independent rect. 17 4
110 24.18 atmosphere 1000 270 > th dose independent sin 16 NA
118 24.19 temperature 25 720 > th dose independent rect. 20 1
132 24.21 wind 7 4320 > th dose dependent rect. 19 9
166 24.24 atmosphere 1000 720 < th dose independent rect. 20 2
171 24.24 atmosphere 1000 90 < th dose independent rect. 21 11
178 24.25 atmosphere 1005 14400 < th dose independent rect. 8 4
202 24.26 wind 5 4320 > th dose dependent rect. 19 19
208 24.27 atmosphere 1000 1440 < th dose dependent rect. 20 6
211 24.27 wind 5 4320 > th dose dependent rect. 19 16
226 24.28 wind 5 4320 > th dose dependent rect. 17 18
241 24.30 atmosphere 1000 10 < th dose independent rect. 14 19
255 24.31 atmosphere 1000 10 < th dose independent rect. 20 13
264 24.32 wind 7 4320 < th dose independent rect. 19 4
271 24.32 atmosphere 1005 14400 > th dose independent rect. 3 11
300 24.33 atmosphere 1005 14400 > th dose independent rect. 3 9
313 24.33 wind 5 4320 > th dose dependent rect. 19 2
338 24.34 atmosphere 1000 1440 < th dose dependent rect. 23 2
345 24.34 wind 5 4320 > th dose dependent rect. 17 21
364 24.35 atmosphere 1000 270 < th dose independent rect. 14 22
374 24.36 atmosphere 1005 14400 > th dose independent sin 3 NA
384 24.36 temperature 20 4320 > th dose dependent rect. 17 1
386 24.36 temperature 15 4320 > th dose dependent rect. 17 4
390 24.36 temperature 10 720 > th dose dependent rect. 13 6
391 24.36 atmosphere 1000 10 < th dose dependent rect. 20 13
394 24.37 atmosphere 995 14400 > th dose independent rect. 17 1
410 24.37 atmosphere 1000 10 < th dose independent rect. 18 15
419 24.37 temperature 15 4320 > th dose dependent rect. 19 2
471 24.39 atmosphere 1005 14400 < th dose independent sin 3 NA
472 24.39 atmosphere 1005 14400 < th dose independent rect. 22 1
515 24.40 atmosphere 1000 270 > th dose independent no NA NA
535 24.40 atmosphere 1005 14400 < th dose independent rect. 21 18
551 24.40 temperature 30 4320 < th dose dependent rect. 17 4
560 24.41 atmosphere 1005 14400 < th dose independent rect. 11 1
563 24.41 atmosphere 995 14400 < th dose independent rect. 17 2
581 24.41 atmosphere 1000 90 > th dose independent rect. 19 12
598 24.41 temperature 30 4320 < th dose dependent rect. 20 1
601 24.41 temperature 30 4320 < th dose dependent rect. 17 2
603 24.41 atmosphere 995 14400 < th dose dependent rect. 17 2
645 24.42 wind 5 4320 > th dose independent rect. 17 18
646 24.42 atmosphere 1005 14400 > th dose independent rect. 21 18
648 24.42 atmosphere 1005 14400 < th dose independent rect. 4 19
659 24.42 atmosphere 1000 270 < th dose independent rect. 20 23
684 24.43 atmosphere 1000 270 < th dose independent no NA NA
700 24.43 atmosphere 1005 14400 < th dose independent rect. 21 15
701 24.43 wind 7 4320 < th dose independent rect. 19 16
711 24.43 atmosphere 1005 14400 < th dose independent rect. 6 17
756 24.44 atmosphere 1000 1440 < th dose independent rect. 20 6
768 24.44 wind 7 4320 > th dose independent rect. 19 16
780 24.44 atmosphere 1005 14400 > th dose independent rect. 3 19
797 24.44 atmosphere 1005 14400 < th dose independent rect. 13 23
824 24.45 atmosphere 1005 14400 < th dose independent no NA NA
885 24.45 atmosphere 1005 14400 < th dose independent rect. 7 22
905 24.45 wind 9 14400 > th dose dependent rect. 18 13
912 24.46 wind 1 4320 > th dose independent rect. 5 1
936 24.46 wind 5 4320 < th dose independent rect. 17 18
975 24.46 atmosphere 1005 14400 < th dose independent rect. 11 23
998 24.47 temperature 25 4320 < th dose independent rect. 2 5