Os08g0205000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0205000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Transferase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 425.97 | 0.97 | 3.75 | -0.561 | 0.0575 | 1.91 | -0.27 | -2.14 | -0.5 | 16.7 | 20.38 | 507 | -- | -- |
| 428.33 | 0.964 | 3.7 | -0.143 | 0.0836 | 1.84 | -0.791 | -- | -0.382 | 17.9 | 19.16 | 480 | -- | -- |
| 426.07 | 0.961 | 3.76 | -0.587 | 0.0247 | 1.93 | -- | -2.32 | -0.506 | 16.4 | 20.5 | 479 | -- | -- |
| 429.87 | 0.966 | 3.7 | -0.134 | 0.0891 | 1.81 | -- | -- | -0.38 | 18 | 19 | 483 | -- | -- |
| 426.08 | 0.961 | 3.76 | -0.612 | -- | 1.96 | -- | -2.41 | -0.519 | -- | 20.51 | 478 | -- | -- |
| 485.56 | 1.03 | 3.65 | 0.308 | 0.729 | -- | -0.27 | -- | -0.0578 | 18.4 | -- | -- | -- | -- |
| 485.74 | 1.03 | 3.65 | 0.312 | 0.728 | -- | -- | -- | -0.0587 | 18.4 | -- | -- | -- | -- |
| 430.18 | 0.966 | 3.71 | -0.158 | -- | 1.88 | -- | -- | -0.395 | -- | 19.1 | 479 | -- | -- |
| 430.32 | 0.966 | 3.7 | -- | 0.107 | 1.74 | -- | -- | -0.356 | 18.2 | 19.5 | 480 | -- | -- |
| 513.3 | 1.06 | 3.63 | 0.293 | -- | -- | -- | -- | -0.074 | -- | -- | -- | -- | -- |
| 488.3 | 1.03 | 3.66 | -- | 0.724 | -- | -- | -- | -0.0935 | 18.5 | -- | -- | -- | -- |
| 430.7 | 0.967 | 3.7 | -- | -- | 1.78 | -- | -- | -0.364 | -- | 20.2 | 468 | -- | -- |
| 515.57 | 1.06 | 3.64 | -- | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 425.66 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 2 | 426.26 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 12 | 427.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 39 | 429.36 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 49 | 429.50 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 15 |
| 59 | 429.74 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 20 |
| 63 | 429.78 | temperature | 25 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 65 | 429.80 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 18 |
| 67 | 429.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 76 | 429.88 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 90 | 429.99 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 20 |
| 100 | 430.08 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 108 | 430.16 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 20 |
| 117 | 430.26 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 20 |
| 141 | 430.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 237 | 431.03 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 20 |
| 244 | 431.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 297 | 431.39 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 23 |
| 303 | 431.46 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |
| 308 | 431.48 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 350 | 431.64 | temperature | 25 | 4320 | > th | dose independent | rect. | 24 | 23 |
| 352 | 431.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 14 |
| 382 | 431.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 383 | 431.79 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 388 | 431.80 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 23 |
| 424 | 431.99 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 439 | 432.11 | temperature | 25 | 4320 | > th | dose independent | sin | 8 | NA |
| 461 | 432.21 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 23 |
| 467 | 432.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 23 |
| 470 | 432.22 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 15 |
| 479 | 432.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 524 | 432.44 | temperature | 25 | 4320 | < th | dose independent | sin | 8 | NA |
| 547 | 432.51 | temperature | 25 | 720 | > th | dose independent | rect. | 24 | 22 |
| 566 | 432.60 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 590 | 432.71 | temperature | 25 | 4320 | > th | dose dependent | sin | 14 | NA |
| 662 | 432.93 | temperature | 20 | 720 | > th | dose dependent | sin | 1 | NA |
| 675 | 432.99 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 21 |
| 732 | 433.17 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 748 | 433.21 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 7 |
| 751 | 433.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 6 |
| 756 | 433.23 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 21 |
| 768 | 433.27 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 792 | 433.33 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 22 |
| 793 | 433.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 910 | 433.68 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 19 |