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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0201500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.82 (0.0532) R2 : 0.591
β1 : -2.07 (0.235) R2dD : 0.107 R2D : -0.0299
β2 : 2.71 (0.125) R2dC : 0.412 R2C : 0.442
β3 : 2.92 (0.282) R2dE : 0.157 R2E : 0.0727
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.179 (0.122) R2dN8 : 0.00199 R2N8 : 0.019
σ : 0.97
deviance : 433.79
__
_____
C
peak time of C : 1.55
E
wheather : temperature
threshold : 18.45
memory length : 3625
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
423.49 0.967 5.91 -2.12 2.69 1.52 1.07 -3.61 0.126 1.66 19.4 2143 -- --
434.79 0.971 5.81 -1.8 2.6 2.61 0.835 -- 0.245 1.56 18.6 2645 -- --
426.92 0.962 5.91 -2.09 2.72 1.54 -- -3.52 0.136 1.63 19.31 2027 -- --
433.79 0.97 5.82 -2.07 2.71 2.92 -- -- 0.179 1.55 18.45 3625 -- --
851.4 1.36 5.91 -2.37 -- 2.11 -- -3.23 0.0321 -- 19.68 2408 -- --
532.98 1.08 5.7 -0.598 2.76 -- 0.74 -- 0.688 1.59 -- -- -- --
535.16 1.08 5.71 -0.622 2.76 -- -- -- 0.684 1.57 -- -- -- --
844.96 1.35 5.8 -2 -- 3.23 -- -- 0.159 -- 18.5 2390 -- --
501.57 1.04 5.72 -- 2.72 1.94 -- -- 0.599 1.42 17.4 3437 -- --
1002.43 1.48 5.67 -0.511 -- -- -- -- 0.744 -- -- -- -- --
545.36 1.09 5.69 -- 2.75 -- -- -- 0.753 1.56 -- -- -- --
911.89 1.41 5.75 -- -- 2.6 -- -- 0.545 -- 18.39 980 -- --
1009.33 1.48 5.66 -- -- -- -- -- 0.801 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 390.01 wind 9 43200 < th dose independent rect. 16 2
2 390.85 humidity 80 14400 > th dose dependent rect. 5 1
3 391.68 wind 9 43200 < th dose independent rect. 16 4
4 391.84 wind 9 43200 < th dose independent rect. 15 19
6 392.34 wind 9 43200 > th dose independent rect. 16 2
7 392.59 temperature 20 14400 > th dose independent rect. 21 1
9 393.02 wind 9 43200 < th dose independent rect. 15 21
10 393.05 temperature 20 14400 < th dose independent rect. 21 1
11 393.16 wind 7 43200 < th dose independent rect. 16 16
12 393.16 wind 9 43200 > th dose independent rect. 15 19
14 393.32 wind 7 43200 > th dose dependent rect. 16 17
17 393.57 wind 7 43200 > th dose independent rect. 16 16
20 393.78 wind 7 43200 > th dose dependent rect. 15 19
21 393.94 wind 7 43200 < th dose independent rect. 17 13
22 393.98 wind 9 43200 > th dose independent rect. 15 21
27 394.23 temperature 20 14400 > th dose independent rect. 20 3
33 394.43 wind 7 43200 > th dose dependent rect. 15 21
42 394.69 wind 7 43200 > th dose independent rect. 17 13
51 395.06 wind 1 43200 > th dose independent rect. 2 1
63 395.90 wind 9 43200 < th dose independent rect. 21 23
64 395.98 wind 7 43200 > th dose dependent rect. 21 23
70 396.20 wind 9 43200 > th dose independent rect. 21 23
83 396.70 wind 7 43200 < th dose independent sin 12 NA
87 396.80 wind 1 14400 > th dose independent rect. 23 3
101 397.32 wind 7 43200 > th dose independent sin 12 NA
118 397.72 wind 1 43200 < th dose independent rect. 2 1
162 398.55 wind 9 43200 > th dose independent rect. 16 4
176 398.76 wind 9 43200 > th dose independent rect. 18 23
184 398.93 wind 9 43200 > th dose independent rect. 4 23
185 398.94 wind 9 43200 > th dose independent no NA NA
190 399.05 wind 9 43200 > th dose independent rect. 1 23
206 399.19 wind 7 43200 > th dose dependent sin 12 NA
210 399.22 wind 9 43200 < th dose independent rect. 18 23
211 399.22 wind 7 43200 > th dose dependent rect. 18 23
218 399.29 humidity 70 43200 > th dose independent rect. 11 1
224 399.33 wind 9 43200 > th dose independent rect. 6 23
228 399.38 wind 7 43200 > th dose dependent no NA NA
232 399.44 wind 9 43200 < th dose independent no NA NA
238 399.51 wind 9 43200 < th dose independent rect. 3 23
239 399.51 wind 7 43200 > th dose dependent rect. 1 23
249 399.65 wind 7 43200 > th dose dependent sin 2 NA
263 399.75 wind 7 43200 > th dose dependent rect. 7 23
266 399.78 wind 1 43200 < th dose dependent rect. 2 1
274 399.87 wind 9 43200 < th dose independent rect. 6 23
311 400.17 wind 9 43200 > th dose independent sin 2 NA
342 400.38 wind 9 43200 < th dose independent sin 2 NA
521 401.96 wind 9 43200 > th dose dependent rect. 9 11
585 402.58 radiation 10 43200 < th dose independent rect. 17 4
592 402.62 radiation 10 43200 < th dose independent rect. 17 9
601 402.65 radiation 10 43200 < th dose independent rect. 17 11
666 403.12 wind 7 43200 > th dose dependent rect. 8 7
702 403.36 wind 9 43200 > th dose dependent sin 20 NA
722 403.49 wind 9 43200 > th dose dependent rect. 10 7
769 403.92 wind 9 43200 > th dose independent rect. 7 8
801 404.14 humidity 70 43200 < th dose independent rect. 11 1
807 404.15 wind 9 43200 > th dose dependent rect. 9 14
857 404.59 wind 9 43200 < th dose independent rect. 7 8
867 404.68 wind 1 14400 < th dose independent rect. 22 4
883 404.89 wind 1 43200 < th dose dependent rect. 10 2
889 404.99 wind 1 14400 < th dose dependent rect. 21 5
987 405.95 wind 9 43200 > th dose dependent rect. 15 2