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Os08g0200600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to NAC-domain containing protein 21/22 (ANAC021) (ANAC022). Splice isoform 2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0651) R2 : 0.546
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.11 (0.17) R2dC : 0.154 R2C : 0.171
β3 : -7.55 (0.479) R2dE : 0.256 R2E : 0.306
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.05 (0.139) R2dN8 : 0.0761 R2N8 : 0.107
σ : 1.22
deviance : 683.72
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C
peak time of C : 5.38
E
wheather : temperature
threshold : 21.22
memory length : 840
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 18.4
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
681.99 1.23 10.7 0.24 2.12 -8.07 -0.775 -1.36 1.1 5.45 20.86 839 18.4 --
681.99 1.22 10.7 0.197 2.11 -7.43 -0.64 -- 1.08 5.43 21.15 841 18.4 --
682.64 1.22 10.7 0.201 2.11 -8 -- -1.25 1.08 5.38 21.17 829 18.2 --
682.98 1.22 10.7 0.182 2.11 -7.46 -- -- 1.08 5.37 21.16 841 18.4 --
908.26 1.4 10.8 0.126 -- -8 -- -1.39 1.08 -- 21.45 897 18.9 --
982.54 1.47 10.6 1.54 2.29 -- -1.23 -- 1.6 4.95 -- -- -- --
986.15 1.47 10.6 1.54 2.28 -- -- -- 1.6 4.84 -- -- -- --
907.67 1.4 10.8 0.14 -- -7.12 -- -- 1.04 -- 21.75 896 19 --
683.72 1.22 10.8 -- 2.11 -7.55 -- -- 1.05 5.38 21.22 840 18.4 --
1261.25 1.66 10.7 1.62 -- -- -- -- 1.66 -- -- -- -- --
1048.56 1.51 10.7 -- 2.31 -- -- -- 1.43 4.82 -- -- -- --
908.03 1.4 10.8 -- -- -7.21 -- -- 1.01 -- 21.74 895 19 --
1330.79 1.7 10.7 -- -- -- -- -- 1.48 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 665.83 humidity 80.0 43200 < th dose dependent rect. 5 2
4 682.14 humidity 90.0 720 > th dose dependent rect. 8 12
6 688.62 humidity 80.0 43200 < th dose dependent rect. 3 5
8 690.29 temperature 20.0 720 < th dose dependent sin 0 NA
10 691.61 humidity 80.0 1440 > th dose dependent rect. 9 3
14 694.60 temperature 20.0 720 < th dose dependent rect. 5 15
16 694.70 temperature 20.0 720 < th dose dependent rect. 4 17
23 696.78 humidity 60.0 43200 < th dose independent rect. 4 3
29 700.02 humidity 60.0 43200 > th dose independent rect. 3 4
32 700.61 humidity 60.0 43200 > th dose independent rect. 1 6
40 702.04 humidity 60.0 43200 < th dose dependent rect. 23 9
49 702.92 humidity 50.0 43200 < th dose dependent rect. 17 15
57 704.22 humidity 60.0 43200 < th dose independent rect. 23 8
58 704.29 humidity 90.0 720 > th dose independent rect. 8 11
65 704.93 temperature 15.0 4320 < th dose dependent rect. 1 1
77 706.85 temperature 15.0 4320 < th dose independent rect. 3 1
79 707.62 humidity 90.0 720 > th dose independent rect. 9 8
89 708.19 humidity 90.0 14400 > th dose dependent rect. 9 1
90 708.22 humidity 50.0 43200 < th dose dependent rect. 19 15
113 710.93 temperature 15.0 4320 > th dose independent rect. 3 1
117 711.09 temperature 15.0 1440 > th dose independent rect. 23 18
119 711.39 humidity 70.0 43200 > th dose independent rect. 3 1
129 711.58 temperature 15.0 4320 < th dose dependent rect. 24 20
132 711.67 temperature 15.0 4320 > th dose independent rect. 3 3
144 712.36 temperature 15.0 4320 > th dose independent rect. 3 6
149 712.46 humidity 90.0 1440 > th dose independent rect. 10 3
156 712.78 humidity 90.0 720 > th dose independent rect. 10 5
164 713.16 temperature 15.0 1440 > th dose independent rect. 23 20
179 713.84 temperature 15.0 4320 < th dose dependent rect. 21 18
182 713.90 temperature 15.0 4320 < th dose dependent sin 1 NA
216 714.44 temperature 15.0 4320 < th dose dependent sin 10 NA
249 714.96 temperature 20.0 720 < th dose dependent rect. 8 8
262 715.23 temperature 15.0 4320 < th dose dependent rect. 19 12
267 715.28 temperature 15.0 4320 > th dose independent rect. 3 12
286 715.53 temperature 15.0 4320 < th dose dependent rect. 21 8
287 715.55 temperature 15.0 4320 > th dose independent rect. 3 10
341 716.29 humidity 50.0 43200 < th dose independent rect. 17 15
357 716.47 temperature 15.0 1440 < th dose independent sin 6 NA
358 716.47 humidity 80.0 43200 > th dose independent rect. 5 2
362 716.49 temperature 15.0 1440 < th dose independent rect. 22 14
374 716.61 humidity 60.0 43200 > th dose independent rect. 1 1
382 716.73 temperature 15.0 4320 < th dose dependent rect. 6 6
383 716.73 temperature 15.0 1440 < th dose dependent rect. 1 14
387 716.76 temperature 15.0 4320 < th dose independent rect. 21 2
405 716.84 temperature 20.0 1440 < th dose dependent rect. 10 1
411 716.90 temperature 15.0 4320 > th dose independent rect. 3 16
417 716.93 temperature 15.0 4320 > th dose independent rect. 3 14
422 716.98 temperature 15.0 1440 < th dose independent rect. 22 9
429 717.03 temperature 15.0 1440 > th dose independent sin 5 NA
432 717.08 temperature 15.0 4320 > th dose independent rect. 7 8
443 717.15 temperature 15.0 4320 < th dose dependent no NA NA
444 717.15 temperature 15.0 4320 < th dose dependent rect. 9 22
537 717.96 humidity 80.0 43200 < th dose independent rect. 5 2
538 717.96 temperature 15.0 1440 < th dose dependent rect. 2 8
550 718.08 temperature 15.0 1440 > th dose independent rect. 1 1
575 718.22 precipitation 0.1 1440 > th dose independent rect. 9 2
577 718.22 precipitation 0.1 1440 > th dose dependent rect. 9 2
586 718.26 temperature 15.0 1440 < th dose dependent rect. 2 5
589 718.26 temperature 15.0 4320 < th dose dependent rect. 4 15
607 718.43 temperature 15.0 1440 < th dose independent rect. 23 3
638 718.72 temperature 15.0 4320 > th dose independent rect. 13 2
679 719.05 temperature 15.0 4320 > th dose independent rect. 7 12
704 719.26 temperature 15.0 4320 > th dose independent rect. 10 5
709 719.29 temperature 20.0 720 < th dose dependent rect. 7 22
726 719.45 temperature 15.0 1440 < th dose dependent rect. 3 1
732 719.49 temperature 15.0 14400 > th dose independent rect. 7 2
750 719.59 radiation 1.0 1440 < th dose dependent rect. 7 4
754 719.63 temperature 15.0 1440 > th dose independent rect. 23 12
763 719.70 temperature 15.0 4320 < th dose independent rect. 3 21
783 719.90 temperature 15.0 4320 < th dose dependent rect. 5 10
809 720.08 temperature 15.0 4320 > th dose independent rect. 10 9
909 720.81 radiation 20.0 4320 < th dose independent rect. 5 1
910 720.82 temperature 15.0 4320 > th dose independent sin 1 NA
914 720.84 humidity 90.0 1440 < th dose independent rect. 9 5
960 721.25 temperature 15.0 4320 > th dose independent rect. 3 21
997 721.58 precipitation 0.1 1440 > th dose dependent rect. 5 8