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Os08g0191700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D- lactoylglutathione methylglyoxal lyase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.62 | 0.256 | 15.3 | -0.547 | 1.05 | -0.968 | -0.479 | 0.143 | -0.136 | 18.6 | 70.26 | 1430 | -- | -- |
| 29.64 | 0.254 | 15.3 | -0.537 | 1.05 | -0.973 | -0.483 | -- | -0.133 | 18.6 | 71 | 1426 | -- | -- |
| 30.2 | 0.256 | 15.3 | -0.547 | 1.05 | -0.978 | -- | 0.132 | -0.139 | 18.6 | 70.62 | 1429 | -- | -- |
| 30.19 | 0.256 | 15.3 | -0.519 | 1.06 | -0.978 | -- | -- | -0.132 | 18.5 | 71 | 1394 | -- | -- |
| 40.46 | 0.296 | 15.3 | -0.544 | -- | -1.28 | -- | 0.44 | -0.153 | -- | 71.7 | 528 | -- | -- |
| 43.52 | 0.309 | 15.3 | -0.552 | 1.03 | -- | -0.491 | -- | -0.0245 | 18.6 | -- | -- | -- | -- |
| 44.13 | 0.311 | 15.3 | -0.544 | 1.03 | -- | -- | -- | -0.0259 | 18.6 | -- | -- | -- | -- |
| 40.83 | 0.298 | 15.3 | -0.511 | -- | -1.27 | -- | -- | -0.149 | -- | 72.11 | 529 | -- | -- |
| 36.94 | 0.283 | 15.3 | -- | 0.992 | -1.02 | -- | -- | -0.0789 | 18.8 | 75.14 | 1561 | -- | -- |
| 98.98 | 0.465 | 15.2 | -0.569 | -- | -- | -- | -- | -0.0469 | -- | -- | -- | -- | -- |
| 51.93 | 0.337 | 15.3 | -- | 1.03 | -- | -- | -- | 0.0347 | 18.5 | -- | -- | -- | -- |
| 47.45 | 0.321 | 15.3 | -- | -- | -1.27 | -- | -- | -0.0999 | -- | 74 | 509 | -- | -- |
| 107.52 | 0.484 | 15.2 | -- | -- | -- | -- | -- | 0.0162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.00 | humidity | 80 | 1440 | > th | dose independent | sin | 22 | NA |
| 2 | 29.01 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 4 | 29.03 | humidity | 80 | 1440 | < th | dose independent | rect. | 24 | 20 |
| 5 | 29.04 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 17 |
| 8 | 29.07 | humidity | 80 | 1440 | < th | dose independent | sin | 22 | NA |
| 11 | 29.10 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 14 | 29.12 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 17 | 29.14 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 32 | 29.21 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 38 | 29.22 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 50 | 29.25 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 57 | 29.28 | humidity | 70 | 1440 | > th | dose dependent | sin | 19 | NA |
| 81 | 29.33 | humidity | 70 | 1440 | > th | dose dependent | rect. | 2 | 19 |
| 121 | 29.42 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 231 | 29.63 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 285 | 29.74 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 19 |
| 287 | 29.74 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 291 | 29.74 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 294 | 29.75 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 307 | 29.76 | humidity | 70 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 358 | 29.84 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 444 | 29.94 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 462 | 29.97 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 542 | 30.09 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 624 | 30.23 | humidity | 80 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 660 | 30.31 | humidity | 80 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 687 | 30.37 | radiation | 1 | 1440 | < th | dose dependent | sin | 15 | NA |
| 688 | 30.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 11 |
| 703 | 30.39 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 6 |
| 730 | 30.43 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 757 | 30.47 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 866 | 30.63 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 871 | 30.64 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 886 | 30.66 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 13 |
