Os08g0190800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Postsynaptic protein CRIPT.
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Os08g0190800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Postsynaptic protein CRIPT.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.01 | 0.253 | 12.5 | -1.4 | 0.343 | -0.255 | 0.286 | 4.93 | -0.13 | 5.03 | 29.59 | 1789 | -- | -- |
| 31.68 | 0.262 | 12.4 | -0.401 | 0.314 | 0.302 | 0.366 | -- | 0.0151 | 5.56 | 29.96 | 4370 | -- | -- |
| 29.16 | 0.251 | 12.5 | -1.38 | 0.341 | -0.252 | -- | 4.98 | -0.13 | 4.95 | 29.54 | 1845 | -- | -- |
| 31.95 | 0.263 | 12.4 | -0.395 | 0.327 | 0.301 | -- | -- | 0.0173 | 4.86 | 29.8 | 4373 | -- | -- |
| 34.81 | 0.275 | 12.5 | -1.13 | -- | -0.0657 | -- | 4.06 | -0.0754 | -- | 29.5 | 2034 | -- | -- |
| 34.99 | 0.277 | 12.4 | -0.476 | 0.32 | -- | 0.4 | -- | 0.0568 | 5.29 | -- | -- | -- | -- |
| 35.37 | 0.279 | 12.4 | -0.476 | 0.322 | -- | -- | -- | 0.0548 | 5.07 | -- | -- | -- | -- |
| 36.38 | 0.282 | 12.4 | -0.406 | -- | 0.238 | -- | -- | 0.0845 | -- | 27.7 | 9243 | -- | -- |
| 35.86 | 0.279 | 12.4 | -- | 0.33 | 0.354 | -- | -- | 0.0609 | 5.04 | 29.9 | 4422 | -- | -- |
| 40.82 | 0.299 | 12.4 | -0.464 | -- | -- | -- | -- | 0.063 | -- | -- | -- | -- | -- |
| 41.33 | 0.301 | 12.4 | -- | 0.314 | -- | -- | -- | 0.108 | 5.12 | -- | -- | -- | -- |
| 40.63 | 0.298 | 12.4 | -- | -- | 0.271 | -- | -- | 0.132 | -- | 27.7 | 9243 | -- | -- |
| 46.5 | 0.318 | 12.4 | -- | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 2 | 27.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 5 | 27.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 15 | 28.40 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 16 | 28.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 17 | 28.41 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 18 | 28.41 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 19 | 28.41 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 20 | 28.42 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 23 | 28.46 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 25 | 28.47 | wind | 1.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 27 | 28.48 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 29 | 28.50 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 35 | 28.51 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 15 |
| 36 | 28.53 | wind | 5.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 40 | 28.55 | wind | 7.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 49 | 28.59 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 18 | 15 |
| 50 | 28.60 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 85 | 28.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 151 | 28.74 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 209 | 28.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 229 | 28.86 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 232 | 28.86 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 302 | 28.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 14 |
| 305 | 28.98 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 311 | 28.98 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 313 | 28.99 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 328 | 29.02 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 330 | 29.02 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 341 | 29.04 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 346 | 29.04 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 347 | 29.04 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 358 | 29.08 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 376 | 29.11 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 377 | 29.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 383 | 29.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 390 | 29.12 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 395 | 29.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 4 |
| 404 | 29.14 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 409 | 29.15 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 411 | 29.15 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 413 | 29.15 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 4 |
| 418 | 29.16 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 458 | 29.22 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 462 | 29.23 | wind | 9.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 507 | 29.28 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 573 | 29.34 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 7 |
| 646 | 29.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 12 |
| 663 | 29.42 | wind | 5.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 667 | 29.42 | atmosphere | 1005.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 676 | 29.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 682 | 29.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 12 |
| 686 | 29.44 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 718 | 29.46 | temperature | 25.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 727 | 29.47 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 872 | 29.55 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 9 |
| 877 | 29.55 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 9 |
| 902 | 29.57 | wind | 5.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 940 | 29.59 | wind | 5.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 970 | 29.61 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 978 | 29.61 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 983 | 29.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 22 |
| 993 | 29.62 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 20 |