Os08g0189700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Oxalate oxidase-like protein or germin-like protein (Germin-like 8) (Germin-like 12).
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Os08g0189700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Oxalate oxidase-like protein or germin-like protein (Germin-like 8) (Germin-like 12).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 296.25 | 0.809 | 3.43 | -0.189 | 1.78 | -1.37 | -2.35 | 2.29 | 0.69 | 4.37 | 2 | 7 | -- | -- |
| 338.81 | 0.857 | 3.56 | -0.901 | 1.61 | -0.494 | -2.64 | -- | 0.212 | 5.21 | 14.22 | 20 | -- | -- |
| 360.57 | 0.884 | 3.57 | -0.775 | 1.68 | -0.414 | -- | 1.45 | 0.244 | 4.57 | 20.21 | 28 | -- | -- |
| 361.07 | 0.885 | 3.57 | -0.89 | 1.55 | -0.493 | -- | -- | 0.195 | 5.13 | 14.32 | 19 | -- | -- |
| 352.52 | 0.874 | 3.76 | -0.854 | -- | -1.68 | -- | 3.15 | 0.00104 | -- | 1.161 | 585 | -- | -- |
| 354.41 | 0.883 | 3.58 | -0.97 | 1.76 | -- | -2.57 | -- | 0.149 | 4.41 | -- | -- | -- | -- |
| 371.46 | 0.903 | 3.58 | -0.95 | 1.73 | -- | -- | -- | 0.163 | 4.14 | -- | -- | -- | -- |
| 360.13 | 0.884 | 3.58 | -0.878 | -- | -1.87 | -- | -- | 0.228 | -- | 1.1 | 560 | -- | -- |
| 382.83 | 0.911 | 3.55 | -- | 1.56 | -0.499 | -- | -- | 0.287 | 5.12 | 14.36 | 19 | -- | -- |
| 534.68 | 1.08 | 3.58 | -0.88 | -- | -- | -- | -- | 0.209 | -- | -- | -- | -- | -- |
| 395.26 | 0.93 | 3.55 | -- | 1.72 | -- | -- | -- | 0.269 | 4.15 | -- | -- | -- | -- |
| 377.61 | 0.905 | 3.56 | -- | -- | -1.87 | -- | -- | 0.339 | -- | 0.554 | 557 | -- | -- |
| 555.11 | 1.1 | 3.56 | -- | -- | -- | -- | -- | 0.307 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 282.88 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 3 |
| 2 | 283.52 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 3 | 284.09 | humidity | 60 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 9 | 284.76 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 20 | 285.15 | radiation | 10 | 1440 | < th | dose dependent | sin | 20 | NA |
| 34 | 285.85 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 11 |
| 50 | 286.17 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 17 |
| 76 | 287.22 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 115 | 290.82 | humidity | 80 | 270 | > th | dose dependent | sin | 8 | NA |
| 124 | 291.69 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 18 |
| 125 | 291.71 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 154 | 292.67 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 169 | 293.13 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 5 |
| 170 | 293.13 | humidity | 50 | 720 | > th | dose dependent | sin | 12 | NA |
| 181 | 293.27 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 213 | 294.02 | radiation | 10 | 1440 | > th | dose independent | sin | 22 | NA |
| 230 | 294.26 | humidity | 80 | 270 | > th | dose dependent | rect. | 23 | 11 |
| 238 | 294.39 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 245 | 294.57 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 247 | 294.59 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 248 | 294.59 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 251 | 294.71 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 257 | 294.80 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 267 | 294.88 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 18 |
| 271 | 294.91 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 288 | 294.98 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 293 | 295.01 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 1 |
| 308 | 295.22 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 5 |
| 374 | 295.71 | humidity | 90 | 270 | < th | dose independent | rect. | 20 | 13 |
| 388 | 295.82 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 21 |
| 456 | 296.22 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 3 |
| 458 | 296.25 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 459 | 296.25 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 546 | 296.38 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 8 |
| 715 | 297.86 | humidity | 90 | 270 | < th | dose dependent | rect. | 20 | 13 |
| 716 | 297.86 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 20 |
| 763 | 298.24 | humidity | 90 | 1440 | < th | dose dependent | rect. | 19 | 21 |
| 804 | 298.53 | humidity | 50 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 822 | 298.68 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 857 | 298.86 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 18 |
| 886 | 299.18 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 902 | 299.36 | humidity | 90 | 270 | < th | dose independent | sin | 7 | NA |
| 908 | 299.39 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 21 |
| 939 | 299.54 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 944 | 299.57 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 1000 | 299.82 | wind | 1 | 270 | < th | dose independent | rect. | 3 | 1 |