Os08g0189300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Oxalate oxidase (Fragment).
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Os08g0189300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Oxalate oxidase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.1 | 0.538 | 2.89 | -0.398 | 0.32 | 0.685 | -1.15 | -2.22 | 0.262 | 6.04 | 7.099 | 1192 | -- | -- |
| 131.86 | 0.535 | 2.91 | -0.335 | 0.316 | 1.11 | -1.31 | -- | 0.272 | 6.01 | 7.197 | 1192 | -- | -- |
| 134.3 | 0.54 | 2.89 | -0.41 | 0.317 | 0.715 | -- | -2.15 | 0.266 | 6.31 | 7.1 | 1192 | -- | -- |
| 134.97 | 0.541 | 2.91 | -0.351 | 0.314 | 1.18 | -- | -- | 0.268 | 6.4 | 7.129 | 1192 | -- | -- |
| 139.42 | 0.55 | 2.89 | -0.401 | -- | 0.671 | -- | -2.34 | 0.275 | -- | 7.078 | 1192 | -- | -- |
| 142.91 | 0.56 | 2.94 | -0.588 | 0.323 | -- | -1.24 | -- | 0.169 | 5.37 | -- | -- | -- | -- |
| 146.7 | 0.567 | 2.93 | -0.59 | 0.317 | -- | -- | -- | 0.175 | 5.64 | -- | -- | -- | -- |
| 140.13 | 0.551 | 2.92 | -0.359 | -- | 1.15 | -- | -- | 0.26 | -- | 7.1 | 1192 | -- | -- |
| 137.76 | 0.547 | 2.91 | -- | 0.312 | 1.37 | -- | -- | 0.299 | 6.59 | 7.199 | 1192 | -- | -- |
| 151.93 | 0.576 | 2.94 | -0.58 | -- | -- | -- | -- | 0.182 | -- | -- | -- | -- | -- |
| 155.88 | 0.584 | 2.92 | -- | 0.308 | -- | -- | -- | 0.241 | 5.72 | -- | -- | -- | -- |
| 142.83 | 0.557 | 2.91 | -- | -- | 1.35 | -- | -- | 0.304 | -- | 7.179 | 1192 | -- | -- |
| 160.8 | 0.592 | 2.92 | -- | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.08 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 13 | 125.08 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 35 | 126.13 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 36 | 126.22 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 2 |
| 37 | 126.22 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 39 | 126.23 | wind | 3.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 41 | 126.27 | wind | 5.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 46 | 126.59 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 48 | 127.03 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 3 | 3 |
| 50 | 127.03 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 53 | 127.15 | wind | 5.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 63 | 127.34 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 5 |
| 65 | 127.35 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 82 | 127.62 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 112 | 128.07 | wind | 5.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 113 | 128.17 | wind | 5.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 167 | 129.25 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 204 | 130.09 | radiation | 30.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 207 | 130.16 | wind | 5.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 217 | 130.26 | wind | 7.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 221 | 130.34 | wind | 7.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 275 | 131.06 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 278 | 131.08 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 319 | 131.37 | wind | 7.0 | 1440 | > th | dose independent | rect. | 4 | 14 |
| 341 | 131.50 | wind | 7.0 | 1440 | < th | dose independent | rect. | 4 | 14 |
| 351 | 131.54 | wind | 1.0 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 369 | 131.63 | wind | 7.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 376 | 131.64 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 385 | 131.68 | wind | 7.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 393 | 131.70 | wind | 7.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 410 | 131.78 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 413 | 131.78 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 421 | 131.80 | precipitation | 0.1 | 10 | > th | dose independent | sin | 1 | NA |
| 422 | 131.80 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 1 | NA |
| 441 | 131.86 | wind | 7.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 519 | 132.09 | wind | 7.0 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 531 | 132.11 | wind | 3.0 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 535 | 132.12 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 537 | 132.13 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 560 | 132.15 | wind | 3.0 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 568 | 132.16 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 4 | 14 |
| 578 | 132.19 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 580 | 132.19 | wind | 5.0 | 720 | > th | dose independent | rect. | 18 | 14 |
| 590 | 132.20 | wind | 3.0 | 720 | > th | dose dependent | rect. | 20 | 10 |
| 596 | 132.21 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 606 | 132.21 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 608 | 132.22 | wind | 5.0 | 720 | > th | dose independent | rect. | 18 | 12 |
| 609 | 132.22 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 12 |
| 647 | 132.27 | wind | 7.0 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 654 | 132.27 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 666 | 132.29 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 669 | 132.30 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 670 | 132.30 | wind | 5.0 | 720 | > th | dose independent | rect. | 20 | 10 |
| 671 | 132.30 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 678 | 132.30 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 10 | 13 |
| 696 | 132.32 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 10 | 15 |
| 721 | 132.35 | wind | 5.0 | 1440 | > th | dose dependent | sin | 21 | NA |
| 734 | 132.37 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 754 | 132.39 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 767 | 132.40 | wind | 5.0 | 720 | < th | dose independent | sin | 12 | NA |
| 818 | 132.45 | wind | 3.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 834 | 132.46 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 10 | 15 |
| 858 | 132.49 | wind | 5.0 | 720 | > th | dose independent | sin | 12 | NA |
| 946 | 132.59 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 949 | 132.59 | wind | 5.0 | 720 | < th | dose independent | rect. | 18 | 8 |
| 969 | 132.60 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 10 | 19 |
| 990 | 132.62 | wind | 9.0 | 720 | < th | dose dependent | rect. | 18 | 8 |