Os08g0189200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Oxalate oxidase (Fragment).
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Os08g0189200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Oxalate oxidase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.33 | 0.371 | 3.03 | 0.0556 | 0.0101 | 1.73 | -0.233 | 8.08 | 0.0728 | 5.35 | 9.9 | 655 | -- | -- |
| 65.11 | 0.376 | 3 | -0.0419 | 0.0344 | -0.0965 | -0.2 | -- | 0.0766 | 3.9 | 10.7 | 377 | -- | -- |
| 61.64 | 0.366 | 3.04 | 0.0969 | 0.0217 | 2.4 | -- | 11.7 | 0.0583 | 21.6 | 10.33 | 552 | -- | -- |
| 65.14 | 0.376 | 3 | -0.0432 | 0.0417 | -0.165 | -- | -- | 0.0712 | 20.8 | 10.7 | 599 | -- | -- |
| 61.61 | 0.366 | 3.04 | 0.101 | -- | 2.46 | -- | 11.8 | 0.0797 | -- | 10.37 | 586 | -- | -- |
| 65.14 | 0.378 | 3 | -0.0382 | 0.0339 | -- | -0.222 | -- | 0.0787 | 4.22 | -- | -- | -- | -- |
| 65.16 | 0.378 | 3 | -0.0364 | 0.0522 | -- | -- | -- | 0.0799 | 0.457 | -- | -- | -- | -- |
| 65.17 | 0.376 | 3 | -0.0483 | -- | -0.133 | -- | -- | 0.073 | -- | 10.72 | 1267 | -- | -- |
| 65.07 | 0.376 | 3 | -- | 0.0422 | -0.128 | -- | -- | 0.0698 | 0.383 | 10.71 | 1243 | -- | -- |
| 65.33 | 0.378 | 3 | -0.0346 | -- | -- | -- | -- | 0.0808 | -- | -- | -- | -- | -- |
| 65.19 | 0.378 | 3 | -- | 0.0517 | -- | -- | -- | 0.084 | 0.421 | -- | -- | -- | -- |
| 65.02 | 0.376 | 3 | -- | -- | -0.128 | -- | -- | 0.0739 | -- | 10.7 | 2580 | -- | -- |
| 65.36 | 0.377 | 3 | -- | -- | -- | -- | -- | 0.0846 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.54 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 60.58 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 4 | 60.63 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 60.68 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 8 | 60.71 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 12 | 60.74 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 13 | 60.74 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 16 | 60.76 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 25 | 60.80 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 60.80 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 28 | 60.80 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 32 | 60.80 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 60.80 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 39 | 60.80 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 40 | 60.80 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 41 | 60.80 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 46 | 60.80 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 49 | 61.02 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 54 | 61.24 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 55 | 61.26 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 17 | 4 |
| 56 | 61.28 | wind | 1.0 | 270 | < th | dose independent | rect. | 19 | 1 |
| 58 | 61.28 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 19 | 1 |
| 59 | 61.28 | wind | 1.0 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 61 | 61.28 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 68 | 61.29 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 70 | 61.29 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 17 | 7 |
| 92 | 61.31 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 19 | 5 |
| 124 | 61.34 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 22 | 3 |
| 136 | 61.35 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 137 | 61.35 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 154 | 61.35 | wind | 9.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 207 | 61.42 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 18 | 7 |
| 221 | 61.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 250 | 61.47 | wind | 9.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 386 | 61.64 | wind | 9.0 | 720 | > th | dose dependent | rect. | 13 | 5 |
| 433 | 61.67 | wind | 9.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 445 | 61.69 | wind | 9.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 515 | 61.76 | atmosphere | 1000.0 | 10 | < th | dose independent | sin | 11 | NA |
| 561 | 61.77 | wind | 9.0 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 565 | 61.78 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 11 | NA |
| 803 | 62.04 | humidity | 70.0 | 30 | < th | dose independent | rect. | 19 | 1 |
| 845 | 62.08 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 870 | 62.11 | wind | 9.0 | 720 | > th | dose independent | rect. | 14 | 1 |
| 882 | 62.14 | atmosphere | 1000.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 922 | 62.20 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 928 | 62.21 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 964 | 62.26 | wind | 9.0 | 1440 | < th | dose independent | rect. | 17 | 1 |