Os08g0187800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glucose-6-phosphate/phosphate-translocator precursor.
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Os08g0187800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucose-6-phosphate/phosphate-translocator precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.57 | 0.334 | 11.8 | 0.5 | 1.77 | -0.334 | 0.433 | -0.551 | 0.00467 | 8.22 | 17.5 | 9 | -- | -- |
| 51.85 | 0.335 | 11.7 | 0.448 | 1.8 | -0.328 | 0.181 | -- | 0.0154 | 8.21 | 16.98 | 8 | -- | -- |
| 50.89 | 0.332 | 11.8 | 0.507 | 1.78 | -0.334 | -- | -0.38 | 0.00654 | 8.21 | 16.94 | 8 | -- | -- |
| 51.69 | 0.335 | 11.8 | 0.505 | 1.78 | -0.346 | -- | -- | 0.00485 | 8.22 | 16.94 | 8 | -- | -- |
| 197.69 | 0.658 | 11.8 | 0.483 | -- | 0.206 | -- | -0.304 | 0.0442 | -- | 16.94 | 8 | -- | -- |
| 56.07 | 0.351 | 11.8 | 0.46 | 1.65 | -- | 0.0823 | -- | 0.00976 | 7.61 | -- | -- | -- | -- |
| 56.09 | 0.351 | 11.8 | 0.462 | 1.65 | -- | -- | -- | 0.00966 | 7.61 | -- | -- | -- | -- |
| 153.31 | 0.579 | 11.8 | 0.45 | -- | 0.663 | -- | -- | -0.00961 | -- | 0.05031 | 17 | -- | -- |
| 57.91 | 0.354 | 11.8 | -- | 1.78 | -0.332 | -- | -- | -0.0463 | 8.21 | 16.97 | 8 | -- | -- |
| 201.96 | 0.664 | 11.8 | 0.485 | -- | -- | -- | -- | 0.0345 | -- | -- | -- | -- | -- |
| 61.72 | 0.367 | 11.8 | -- | 1.65 | -- | -- | -- | -0.0418 | 7.59 | -- | -- | -- | -- |
| 158.65 | 0.589 | 11.8 | -- | -- | 0.669 | -- | -- | -0.0599 | -- | 0.03915 | 17 | -- | -- |
| 208.17 | 0.673 | 11.8 | -- | -- | -- | -- | -- | -0.0193 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.81 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 34 | 43.83 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 35 | 43.83 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 56 | 44.24 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 62 | 44.34 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 77 | 44.57 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 87 | 44.72 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 17 |
| 106 | 44.94 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 111 | 44.98 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 120 | 45.04 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 11 |
| 122 | 45.05 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 127 | 45.08 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 8 |
| 139 | 45.15 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 246 | 45.83 | temperature | 25.0 | 270 | > th | dose independent | sin | 5 | NA |
| 281 | 46.01 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 290 | 46.07 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 351 | 46.30 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 363 | 46.35 | temperature | 25.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 369 | 46.37 | temperature | 25.0 | 270 | < th | dose independent | sin | 6 | NA |
| 374 | 46.38 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 17 |
| 378 | 46.38 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 394 | 46.44 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 402 | 46.47 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 454 | 46.63 | temperature | 25.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 474 | 46.67 | wind | 7.0 | 30 | < th | dose independent | rect. | 8 | 20 |
| 475 | 46.67 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 518 | 46.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 524 | 46.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 15 |
| 527 | 46.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 558 | 46.93 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 20 |
| 567 | 46.95 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 16 |
| 575 | 46.96 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 578 | 46.97 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 582 | 46.98 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 583 | 46.98 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 584 | 46.98 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 587 | 46.98 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 588 | 46.98 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 594 | 46.98 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 595 | 46.98 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 597 | 46.98 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 607 | 47.00 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 8 |
| 625 | 47.04 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 641 | 47.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 678 | 47.16 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 687 | 47.19 | temperature | 10.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 690 | 47.20 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 7 |
| 691 | 47.20 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 719 | 47.27 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 19 |
| 722 | 47.27 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 19 |
| 740 | 47.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 19 |
| 743 | 47.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 755 | 47.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 756 | 47.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 17 |
| 758 | 47.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 764 | 47.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 777 | 47.35 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 15 | 17 |
| 779 | 47.35 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 800 | 47.36 | temperature | 25.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 802 | 47.36 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 819 | 47.38 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 855 | 47.43 | radiation | 1.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 858 | 47.43 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 16 |
| 887 | 47.49 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 902 | 47.52 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 15 | 8 |
| 923 | 47.56 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 21 | 7 |
| 930 | 47.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 940 | 47.58 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 8 |
| 961 | 47.62 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 962 | 47.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 963 | 47.62 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 964 | 47.62 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 967 | 47.62 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 968 | 47.62 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 974 | 47.62 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 976 | 47.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 978 | 47.62 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 19 |
| 981 | 47.62 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 5 |
| 992 | 47.63 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 8 |