Os08g0184800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0184800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.42 | 0.468 | 8.78 | 1.64 | 1.15 | 1.26 | -0.357 | -0.543 | 0.636 | 20.9 | 21.2 | 1474 | -- | -- |
| 99.85 | 0.465 | 8.76 | 1.78 | 1.13 | 1.3 | -0.346 | -- | 0.663 | 20.8 | 21.3 | 1444 | -- | -- |
| 99.57 | 0.465 | 8.78 | 1.66 | 1.14 | 1.25 | -- | -0.545 | 0.632 | 20.8 | 21.3 | 1437 | -- | -- |
| 100.21 | 0.466 | 8.76 | 1.8 | 1.14 | 1.29 | -- | -- | 0.667 | 20.8 | 21.3 | 1433 | -- | -- |
| 152.9 | 0.576 | 8.76 | 1.81 | -- | 1.36 | -- | -0.322 | 0.631 | -- | 21.4 | 720 | -- | -- |
| 146.06 | 0.567 | 8.68 | 2.32 | 1.15 | -- | -0.364 | -- | 1.02 | 21 | -- | -- | -- | -- |
| 146.51 | 0.567 | 8.68 | 2.33 | 1.15 | -- | -- | -- | 1.02 | 21 | -- | -- | -- | -- |
| 153.75 | 0.578 | 8.74 | 1.85 | -- | 1.36 | -- | -- | 0.639 | -- | 21.37 | 718 | -- | -- |
| 113.47 | 0.496 | 8.85 | -- | 1.13 | 2.31 | -- | -- | 0.296 | 21 | 17 | 46899 | -- | -- |
| 222.42 | 0.697 | 8.65 | 2.33 | -- | -- | -- | -- | 1.01 | -- | -- | -- | -- | -- |
| 289.97 | 0.797 | 8.74 | -- | 1.15 | -- | -- | -- | 0.759 | 21.1 | -- | -- | -- | -- |
| 186.31 | 0.636 | 8.83 | -- | -- | 2.32 | -- | -- | 0.294 | -- | 17.04 | 46973 | -- | -- |
| 366.15 | 0.893 | 8.71 | -- | -- | -- | -- | -- | 0.753 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 14 | 101.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 15 | 101.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 8 |
| 47 | 102.07 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 104 | 102.84 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 108 | 102.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 17 |
| 123 | 103.05 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 17 |
| 127 | 103.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 138 | 103.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 160 | 103.32 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 165 | 103.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 168 | 103.35 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 178 | 103.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 218 | 103.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 225 | 103.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 257 | 103.67 | temperature | 20 | 1440 | < th | dose independent | sin | 6 | NA |
| 264 | 103.68 | temperature | 20 | 1440 | > th | dose independent | sin | 6 | NA |
| 286 | 103.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 319 | 103.88 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 356 | 103.97 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 376 | 104.04 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 22 |
| 508 | 104.38 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 561 | 104.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 606 | 104.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 609 | 104.70 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 618 | 104.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 651 | 104.83 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 654 | 104.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 668 | 104.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 709 | 104.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 772 | 105.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 886 | 105.48 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 961 | 105.71 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 966 | 105.72 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 968 | 105.73 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 990 | 105.86 | wind | 3 | 43200 | < th | dose independent | rect. | 21 | 2 |