Os08g0184600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0184600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.49 | 0.389 | 9.79 | 0.534 | 1.46 | 0.671 | -0.38 | 0.57 | 0.721 | 21.2 | 71 | 1213 | -- | -- |
| 69.04 | 0.387 | 9.78 | 0.616 | 1.48 | 0.716 | -0.453 | -- | 0.748 | 21.2 | 70.22 | 1191 | -- | -- |
| 68.86 | 0.386 | 9.8 | 0.534 | 1.48 | 0.679 | -- | 0.686 | 0.721 | 21.2 | 70.72 | 1189 | -- | -- |
| 69.5 | 0.388 | 9.8 | 0.623 | 1.48 | 0.686 | -- | -- | 0.653 | 21.2 | 69 | 1189 | -- | -- |
| 179.27 | 0.624 | 9.76 | 0.394 | -- | 0.644 | -- | 0.979 | 0.68 | -- | 71.91 | 2969 | -- | -- |
| 86.74 | 0.437 | 9.8 | 0.46 | 1.37 | -- | -0.608 | -- | 0.654 | 20.8 | -- | -- | -- | -- |
| 87.98 | 0.439 | 9.8 | 0.48 | 1.37 | -- | -- | -- | 0.654 | 20.8 | -- | -- | -- | -- |
| 178.5 | 0.622 | 9.74 | 0.559 | -- | 0.757 | -- | -- | 0.726 | -- | 72.01 | 2935 | -- | -- |
| 79.91 | 0.416 | 9.81 | -- | 1.47 | 0.642 | -- | -- | 0.638 | 21.2 | 69.34 | 1187 | -- | -- |
| 194.2 | 0.651 | 9.76 | 0.479 | -- | -- | -- | -- | 0.644 | -- | -- | -- | -- | -- |
| 94.06 | 0.454 | 9.81 | -- | 1.37 | -- | -- | -- | 0.601 | 20.8 | -- | -- | -- | -- |
| 186.22 | 0.636 | 9.75 | -- | -- | 0.729 | -- | -- | 0.686 | -- | 72.01 | 2934 | -- | -- |
| 200.24 | 0.661 | 9.78 | -- | -- | -- | -- | -- | 0.59 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.40 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 7 | 67.75 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 9 | 67.80 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 11 | 67.83 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 13 | 67.85 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 30 | 68.05 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 44 | 68.28 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 46 | 68.29 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 58 | 68.44 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 63 | 68.46 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 65 | 68.47 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 72 | 68.51 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 13 |
| 77 | 68.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 85 | 68.59 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 13 |
| 96 | 68.63 | wind | 9.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 99 | 68.64 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 119 | 68.72 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 120 | 68.72 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 127 | 68.74 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 157 | 68.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 163 | 68.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 166 | 68.83 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 201 | 68.90 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 207 | 68.92 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 294 | 69.11 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 313 | 69.16 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 346 | 69.26 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 385 | 69.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 463 | 69.52 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 513 | 69.62 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 567 | 69.76 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 603 | 69.86 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 644 | 69.96 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 680 | 70.07 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 685 | 70.09 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 704 | 70.15 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 733 | 70.23 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 764 | 70.33 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 770 | 70.35 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 778 | 70.39 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 782 | 70.40 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 783 | 70.41 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 793 | 70.43 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 834 | 70.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 860 | 70.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 881 | 70.66 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 906 | 70.70 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 907 | 70.70 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 4 | NA |
| 911 | 70.71 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 913 | 70.71 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 917 | 70.72 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 954 | 70.77 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 9 | NA |