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Os08g0184300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0245) R2 : 0.512
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.38 (0.064) R2dC : 0.496 R2C : 0.495
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.182 (0.0517) R2dN8 : 0.0172 R2N8 : 0.0162
σ : 0.463
deviance : 97.91
__
_____
C
peak time of C : 17.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
83.19 0.429 12.4 0.237 1.29 0.947 0.593 1.42 -0.188 18.1 18.41 75 -- --
85.97 0.432 12.4 0.243 1.28 0.794 0.551 -- -0.188 18.1 13.49 75 -- --
84.03 0.427 12.4 0.241 1.28 0.944 -- 1.39 -0.185 18.1 17.39 75 -- --
86.73 0.434 12.4 0.241 1.3 0.8 -- -- -0.182 18.2 10.21 70 -- --
133.2 0.538 12.4 0.243 -- 1.33 -- 0.449 -0.284 -- -0.3436 625 -- --
95.33 0.458 12.4 0.252 1.38 -- 0.602 -- -0.157 17.2 -- -- -- --
96.24 0.459 12.4 0.252 1.38 -- -- -- -0.154 17.2 -- -- -- --
132.84 0.537 12.4 0.147 -- 1.34 -- -- -0.303 -- -0.7443 617 -- --
88.34 0.438 12.4 -- 1.29 0.813 -- -- -0.197 18.3 8.015 70 -- --
196.08 0.654 12.4 0.203 -- -- -- -- -0.189 -- -- -- -- --
97.91 0.463 12.4 -- 1.38 -- -- -- -0.182 17.2 -- -- -- --
133.4 0.538 12.4 -- -- 1.35 -- -- -0.32 -- -44.41 617 -- --
197.17 0.655 12.4 -- -- -- -- -- -0.211 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.03 temperature 10.0 10 > th dose dependent rect. 15 18
7 71.74 temperature 15.0 10 > th dose dependent rect. 3 6
8 71.84 temperature 15.0 90 > th dose dependent rect. 3 5
16 72.30 wind 5.0 90 < th dose independent rect. 3 6
27 72.78 temperature 10.0 10 > th dose dependent rect. 9 6
28 72.82 radiation 30.0 90 < th dose independent rect. 3 6
29 72.85 temperature 15.0 90 > th dose independent rect. 15 17
33 72.93 temperature 10.0 270 > th dose dependent rect. 1 6
34 72.97 wind 5.0 10 < th dose independent rect. 4 5
35 73.00 wind 5.0 270 < th dose independent rect. 1 7
36 73.01 temperature 15.0 10 > th dose independent rect. 15 18
40 73.11 temperature 30.0 90 < th dose independent rect. 3 6
41 73.13 radiation 40.0 10 < th dose independent rect. 4 16
49 73.27 wind 9.0 90 < th dose dependent rect. 3 6
53 73.38 precipitation 0.1 90 < th dose independent rect. 3 6
54 73.38 precipitation 0.1 90 < th dose independent rect. 8 7
55 73.38 precipitation 0.1 90 < th dose dependent rect. 3 6
56 73.38 precipitation 0.1 90 < th dose dependent rect. 8 7
64 73.59 temperature 10.0 90 > th dose independent rect. 8 7
65 73.59 atmosphere 1015.0 90 < th dose independent rect. 8 7
67 73.61 wind 5.0 270 < th dose independent rect. 4 1
68 73.62 humidity 60.0 90 > th dose independent rect. 3 6
69 73.62 atmosphere 995.0 90 > th dose independent rect. 8 7
70 73.62 wind 9.0 90 < th dose independent rect. 9 18
72 73.63 radiation 1.0 10 > th dose independent rect. 9 6
75 73.65 precipitation 0.1 90 < th dose independent rect. 9 18
76 73.65 precipitation 0.1 90 < th dose dependent rect. 9 18
77 73.68 wind 9.0 10 < th dose dependent rect. 4 5
79 73.70 temperature 10.0 90 > th dose independent rect. 3 6
82 73.70 atmosphere 995.0 90 > th dose independent rect. 3 6
83 73.70 atmosphere 1015.0 90 < th dose independent rect. 3 6
84 73.70 temperature 10.0 90 > th dose independent rect. 9 18
87 73.78 precipitation 0.1 10 < th dose independent rect. 4 5
88 73.78 precipitation 0.1 10 < th dose dependent rect. 4 5
91 73.83 wind 9.0 90 < th dose independent rect. 8 7
92 73.84 temperature 10.0 10 > th dose independent rect. 9 6
94 73.84 atmosphere 995.0 10 > th dose independent rect. 9 6
95 73.84 atmosphere 1015.0 10 < th dose independent rect. 9 6
96 73.84 precipitation 0.1 10 < th dose independent rect. 9 6
98 73.84 precipitation 0.1 10 < th dose dependent rect. 9 6
99 73.85 radiation 1.0 90 > th dose independent rect. 8 7
108 73.89 temperature 10.0 10 > th dose independent rect. 4 5
110 73.89 temperature 30.0 10 < th dose independent rect. 4 5
111 73.89 humidity 50.0 10 > th dose independent rect. 4 5
113 73.89 atmosphere 995.0 10 > th dose independent rect. 4 5
114 73.89 atmosphere 1015.0 10 < th dose independent rect. 4 5
115 73.89 temperature 10.0 10 > th dose independent rect. 9 19
116 73.91 radiation 40.0 90 < th dose independent rect. 15 17
118 73.94 wind 9.0 90 < th dose independent rect. 15 17
128 74.00 wind 9.0 10 < th dose independent rect. 9 19
130 74.02 atmosphere 1000.0 10 > th dose independent rect. 20 8
134 74.11 temperature 10.0 1440 > th dose independent rect. 10 6
137 74.11 temperature 10.0 1440 > th dose independent rect. 16 18
142 74.16 atmosphere 1000.0 270 > th dose independent rect. 19 7
143 74.16 radiation 40.0 90 < th dose independent rect. 3 16
145 74.16 atmosphere 995.0 10 > th dose independent rect. 9 19
146 74.17 temperature 10.0 270 > th dose dependent rect. 3 3
148 74.19 wind 9.0 10 < th dose independent rect. 9 6
149 74.19 wind 9.0 10 < th dose independent rect. 15 18
167 74.25 atmosphere 1015.0 10 < th dose independent rect. 15 18
181 74.38 atmosphere 995.0 90 > th dose independent rect. 9 18
183 74.40 wind 1.0 30 > th dose independent rect. 9 6
192 74.47 precipitation 0.1 270 < th dose independent rect. 1 7
194 74.47 precipitation 0.1 270 < th dose dependent rect. 1 7
196 74.49 temperature 15.0 270 > th dose independent rect. 13 18
197 74.50 precipitation 0.1 10 < th dose independent rect. 15 18
199 74.50 precipitation 0.1 10 < th dose dependent rect. 15 18
205 74.57 radiation 20.0 270 < th dose independent rect. 1 7
208 74.58 radiation 1.0 270 < th dose independent rect. 18 9
209 74.58 radiation 40.0 10 < th dose independent rect. 15 18
224 74.62 wind 9.0 270 < th dose dependent rect. 1 6
225 74.63 radiation 1.0 270 < th dose dependent rect. 18 9
228 74.66 radiation 40.0 10 < th dose independent rect. 4 5
230 74.68 temperature 10.0 270 > th dose dependent rect. 9 1
247 74.82 precipitation 0.1 90 < th dose independent rect. 15 17
248 74.82 precipitation 0.1 90 < th dose dependent rect. 15 17
254 74.86 humidity 50.0 270 > th dose independent rect. 7 6
255 74.87 humidity 60.0 270 > th dose independent rect. 18 9
256 74.87 wind 9.0 270 < th dose dependent rect. 4 1
264 74.92 humidity 50.0 30 > th dose independent rect. 9 19
267 74.93 radiation 40.0 270 < th dose independent rect. 1 7
269 74.93 precipitation 0.1 270 < th dose independent rect. 3 15
272 74.93 precipitation 0.1 270 < th dose dependent rect. 3 15
274 74.94 temperature 10.0 270 > th dose independent rect. 1 7
276 74.94 temperature 30.0 270 < th dose independent rect. 1 7
277 74.94 humidity 50.0 270 > th dose independent rect. 1 7
279 74.94 atmosphere 995.0 270 > th dose independent rect. 1 7
280 74.94 atmosphere 1015.0 270 < th dose independent rect. 1 7
291 74.98 temperature 10.0 270 > th dose independent rect. 18 9
296 74.98 temperature 10.0 270 > th dose independent rect. 3 15
297 74.98 atmosphere 1015.0 270 < th dose independent rect. 3 15
303 75.00 precipitation 0.1 270 < th dose independent rect. 3 2
304 75.00 precipitation 0.1 270 < th dose dependent rect. 3 2
313 75.04 wind 9.0 270 < th dose independent rect. 18 9
314 75.04 precipitation 0.1 270 < th dose independent rect. 13 18
317 75.04 precipitation 0.1 270 < th dose dependent rect. 13 18
322 75.06 temperature 30.0 270 < th dose independent rect. 18 9
323 75.07 precipitation 0.1 270 < th dose independent rect. 6 8
326 75.07 precipitation 0.1 270 < th dose dependent rect. 6 8
329 75.10 radiation 40.0 270 < th dose dependent rect. 1 7
339 75.16 atmosphere 995.0 10 > th dose dependent rect. 20 8
355 75.20 temperature 30.0 10 < th dose dependent rect. 20 8
357 75.21 atmosphere 995.0 90 > th dose independent rect. 15 17
362 75.24 humidity 90.0 10 < th dose independent rect. 9 6
363 75.24 humidity 90.0 90 < th dose independent rect. 8 7
365 75.24 wind 9.0 270 < th dose independent rect. 6 8
366 75.24 temperature 10.0 270 > th dose independent rect. 6 8
367 75.24 atmosphere 995.0 270 > th dose independent rect. 6 8
368 75.24 atmosphere 1015.0 270 < th dose independent rect. 6 8
377 75.26 radiation 30.0 90 < th dose independent rect. 13 20
398 75.34 wind 9.0 270 < th dose independent rect. 13 18
410 75.35 atmosphere 995.0 10 > th dose independent rect. 15 18
424 75.39 radiation 1.0 270 < th dose dependent rect. 4 1
461 75.46 wind 9.0 270 < th dose independent rect. 3 15
463 75.46 radiation 40.0 10 < th dose dependent rect. 4 16
478 75.52 temperature 10.0 270 > th dose independent rect. 4 1
480 75.52 temperature 30.0 270 < th dose independent rect. 4 1
481 75.52 humidity 50.0 270 > th dose independent rect. 4 1
484 75.52 atmosphere 995.0 270 > th dose independent rect. 4 1
485 75.52 atmosphere 1010.0 270 < th dose independent rect. 4 1
487 75.52 radiation 20.0 270 < th dose independent rect. 4 1
491 75.52 temperature 10.0 270 > th dose independent rect. 5 23
494 75.53 radiation 40.0 270 < th dose dependent rect. 4 1
498 75.54 radiation 20.0 270 < th dose dependent rect. 4 1
501 75.55 radiation 30.0 90 < th dose independent rect. 3 8
525 75.60 radiation 1.0 270 < th dose independent rect. 4 1
539 75.63 temperature 10.0 270 > th dose dependent rect. 8 3
550 75.65 humidity 50.0 270 > th dose dependent rect. 18 8
621 75.84 wind 9.0 270 < th dose independent rect. 5 22
655 75.92 temperature 30.0 270 < th dose dependent rect. 19 7
672 75.95 radiation 40.0 270 < th dose dependent rect. 2 5
674 75.96 atmosphere 1000.0 10 > th dose dependent rect. 4 5
721 76.05 humidity 50.0 270 > th dose independent rect. 9 1
728 76.07 precipitation 0.1 270 < th dose independent rect. 18 9
731 76.07 precipitation 0.1 270 < th dose dependent rect. 18 9
775 76.22 precipitation 0.1 270 < th dose independent rect. 9 1
777 76.22 precipitation 0.1 270 < th dose dependent rect. 9 1
785 76.24 wind 9.0 270 < th dose independent rect. 9 1
789 76.25 temperature 10.0 270 > th dose independent rect. 9 1
790 76.25 atmosphere 995.0 270 > th dose independent rect. 9 1
791 76.25 atmosphere 1015.0 270 < th dose independent rect. 9 1
794 76.25 temperature 10.0 270 > th dose independent rect. 10 23
806 76.28 radiation 1.0 270 > th dose independent rect. 9 1
825 76.33 humidity 50.0 270 > th dose dependent rect. 4 1
835 76.35 atmosphere 1015.0 90 < th dose dependent rect. 15 17
877 76.41 atmosphere 995.0 10 > th dose dependent rect. 9 19
881 76.43 wind 1.0 270 > th dose independent rect. 9 1
917 76.47 atmosphere 995.0 270 > th dose dependent rect. 18 8
949 76.56 radiation 1.0 270 < th dose dependent rect. 5 22