Os08g0180400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, BED-type predicted domain containing protein.
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Os08g0180400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, BED-type predicted domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 179.84 | 0.63 | 5.71 | 1.98 | 0.784 | 1.21 | -1.26 | 5.38 | 0.287 | 19 | 5.519 | 412 | -- | -- |
| 181.69 | 0.633 | 5.82 | 1.19 | 0.997 | 1.48 | -0.0167 | -- | 0.0864 | 20.9 | 24.4 | 76 | -- | -- |
| 181.66 | 0.628 | 5.75 | 1.74 | 0.834 | 1.35 | -- | 4.14 | 0.22 | 19.9 | 14.18 | 244 | -- | -- |
| 181.69 | 0.632 | 5.82 | 1.19 | 0.997 | 1.48 | -- | -- | 0.0864 | 20.9 | 24.4 | 76 | -- | -- |
| 208.85 | 0.673 | 5.74 | 1.67 | -- | 1.85 | -- | 4.2 | 0.126 | -- | 15.13 | 414 | -- | -- |
| 215.64 | 0.688 | 5.79 | 1.43 | 1.15 | -- | 0.0927 | -- | 0.244 | 18.8 | -- | -- | -- | -- |
| 215.66 | 0.688 | 5.79 | 1.42 | 1.15 | -- | -- | -- | 0.245 | 18.8 | -- | -- | -- | -- |
| 208.71 | 0.673 | 5.8 | 1.11 | -- | 1.63 | -- | -- | 0.0386 | -- | 23.82 | 376 | -- | -- |
| 215.49 | 0.684 | 5.87 | -- | 0.874 | 1.73 | -- | -- | -0.138 | 21.4 | 22.75 | 94 | -- | -- |
| 285.28 | 0.789 | 5.76 | 1.4 | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
| 269.13 | 0.767 | 5.82 | -- | 1.14 | -- | -- | -- | 0.0859 | 18.9 | -- | -- | -- | -- |
| 239.1 | 0.72 | 5.85 | -- | -- | 1.83 | -- | -- | -0.147 | -- | 22.92 | 396 | -- | -- |
| 336.89 | 0.857 | 5.8 | -- | -- | -- | -- | -- | 0.067 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 177.23 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 2 | 177.38 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 7 | 177.73 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 11 | 178.16 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 12 | 178.20 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 16 | 178.49 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 28 | 178.75 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 51 | 179.33 | wind | 7.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 59 | 179.51 | wind | 7.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 154 | 180.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 156 | 180.32 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 216 | 180.70 | temperature | 10.0 | 270 | > th | dose dependent | no | NA | NA |
| 224 | 180.72 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 14 |
| 228 | 180.74 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 241 | 180.81 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 250 | 180.83 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 263 | 180.88 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 306 | 181.04 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 315 | 181.08 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 358 | 181.24 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 365 | 181.26 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 366 | 181.27 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 379 | 181.32 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 404 | 181.39 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 409 | 181.43 | temperature | 25.0 | 10 | > th | dose dependent | no | NA | NA |
| 468 | 181.57 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 561 | 181.78 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 586 | 181.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 601 | 181.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 602 | 181.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 770 | 182.15 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 797 | 182.20 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 813 | 182.23 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 12 | 12 |
| 920 | 182.40 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 924 | 182.41 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 997 | 182.50 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 10 |