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Os08g0179000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Receptor-like kinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.44 (0.0427) R2 : 0.804
β1 : -3.46 (0.156) R2dD : 0.217 R2D : 0.221
β2 : 3.37 (0.108) R2dC : 0.431 R2C : 0.482
β3 : -2.31 (0.155) R2dE : 0.097 R2E : 0.166
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.193 (0.0911) R2dN8 : 0.00259 R2N8 : -0.008
σ : 0.797
deviance : 292.75
__
_____
C
peak time of C : 8.59
E
wheather : temperature
threshold : 11.07
memory length : 186
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 22.4
open length of G : 4.64

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
281.67 0.789 7.44 -3.48 3.46 -2.44 2.06 0.383 -0.212 8.5 10.53 242 22.2 4.35
280.66 0.78 7.45 -3.49 3.44 -2.38 2.05 -- -0.227 8.54 11.81 200 22.4 4.67
292.64 0.797 7.44 -3.48 3.38 -2.27 -- -0.331 -0.217 8.56 11.06 190 22.3 4.68
292.75 0.797 7.44 -3.46 3.37 -2.31 -- -- -0.193 8.59 11.07 186 22.4 4.64
751.41 1.28 7.5 -3.1 -- -3.02 -- 0.342 -0.0838 -- 10.39 75 21.1 6.08
347.1 0.873 7.45 -3.59 3.68 -- 1.74 -- -0.252 9.79 -- -- -- --
358.61 0.887 7.45 -3.52 3.67 -- -- -- -0.248 9.8 -- -- -- --
544.85 1.09 7.56 -3.25 -- -2.45 -- -- 0.286 -- -13 224 16.5 9.85
439.88 0.977 7.19 -- 3.62 -2.49 -- -- 0.87 9.79 8.263 47520 23.1 4.3
1160.68 1.59 7.55 -3.56 -- -- -- -- -0.245 -- -- -- -- --
685.97 1.23 7.36 -- 3.68 -- -- -- 0.144 9.88 -- -- -- --
673.12 1.21 7.44 -- -- -3 -- -- 0.347 -- -83.18 160 14.7 12.7
1495.26 1.8 7.46 -- -- -- -- -- 0.15 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 282.75 temperature 10.0 270 > th dose dependent rect. 22 4
2 282.78 temperature 15.0 270 > th dose dependent rect. 23 2
7 286.48 temperature 20.0 270 > th dose independent rect. 23 2
9 286.78 atmosphere 995.0 270 > th dose dependent rect. 23 2
10 287.08 humidity 50.0 270 > th dose independent rect. 3 18
12 287.88 temperature 15.0 270 > th dose independent rect. 3 18
13 288.02 atmosphere 995.0 270 > th dose dependent rect. 22 4
14 288.43 temperature 20.0 270 > th dose independent rect. 22 4
18 288.81 temperature 15.0 270 > th dose independent rect. 2 20
24 289.23 atmosphere 1000.0 270 > th dose independent rect. 23 2
25 289.29 humidity 80.0 270 > th dose independent rect. 23 2
27 289.88 humidity 50.0 270 > th dose independent rect. 2 20
29 289.94 precipitation 0.1 270 < th dose independent rect. 3 18
30 289.94 precipitation 0.1 270 < th dose dependent rect. 3 18
31 290.07 temperature 15.0 270 > th dose independent rect. 1 22
39 290.76 humidity 50.0 270 > th dose dependent rect. 23 2
40 290.96 atmosphere 1000.0 270 > th dose independent rect. 22 4
41 291.04 humidity 80.0 270 > th dose independent rect. 22 4
42 291.07 wind 9.0 270 < th dose dependent rect. 23 2
44 291.20 atmosphere 1015.0 270 < th dose independent rect. 3 18
45 291.20 precipitation 0.1 270 < th dose independent rect. 2 20
46 291.20 precipitation 0.1 270 < th dose dependent rect. 2 20
47 291.23 wind 9.0 270 < th dose independent rect. 21 6
49 291.25 temperature 10.0 270 > th dose independent rect. 21 6
50 291.25 temperature 30.0 270 < th dose independent rect. 21 6
51 291.25 humidity 50.0 270 > th dose independent rect. 21 6
54 291.25 atmosphere 995.0 270 > th dose independent rect. 21 6
55 291.25 radiation 1.0 270 < th dose independent rect. 21 6
61 291.25 radiation 1.0 270 < th dose dependent rect. 21 6
66 291.26 precipitation 0.1 270 < th dose independent rect. 23 2
67 291.26 precipitation 0.1 270 < th dose dependent rect. 23 2
68 291.28 precipitation 0.1 270 < th dose independent rect. 21 6
69 291.28 precipitation 0.1 270 < th dose dependent rect. 21 6
70 291.35 wind 9.0 270 < th dose independent rect. 23 2
71 291.35 temperature 10.0 270 > th dose independent rect. 23 2
72 291.35 temperature 30.0 270 < th dose independent rect. 23 2
73 291.35 humidity 50.0 270 > th dose independent rect. 23 2
77 291.35 radiation 1.0 270 < th dose independent rect. 23 2
83 291.35 radiation 1.0 270 < th dose dependent rect. 23 2
95 291.76 wind 9.0 270 < th dose independent rect. 3 18
101 292.11 precipitation 0.1 270 < th dose independent rect. 1 22
102 292.11 humidity 50.0 270 > th dose dependent rect. 21 6
103 292.11 precipitation 0.1 270 < th dose dependent rect. 1 22
105 292.24 precipitation 0.1 270 < th dose independent rect. 22 4
106 292.24 precipitation 0.1 270 < th dose dependent rect. 22 4
109 292.46 wind 9.0 270 < th dose independent rect. 22 4
110 292.47 temperature 10.0 270 > th dose independent rect. 22 4
111 292.47 temperature 30.0 270 < th dose independent rect. 22 4
112 292.47 humidity 50.0 270 > th dose independent rect. 22 4
116 292.47 radiation 1.0 270 < th dose independent rect. 22 4
122 292.47 radiation 1.0 270 < th dose dependent rect. 22 4
129 292.58 radiation 40.0 270 < th dose independent rect. 2 9
130 292.59 temperature 20.0 10 > th dose independent rect. 24 4
132 292.64 precipitation 0.1 270 < th dose independent rect. 2 9
133 292.64 precipitation 0.1 270 < th dose dependent rect. 2 9
136 292.77 humidity 50.0 270 > th dose dependent rect. 22 4
138 292.87 temperature 15.0 270 > th dose independent rect. 2 9
142 293.16 wind 9.0 270 < th dose independent rect. 2 20
146 293.35 wind 9.0 270 < th dose independent rect. 1 22
174 293.83 temperature 30.0 270 < th dose independent rect. 2 9
176 294.10 humidity 50.0 270 > th dose independent rect. 14 8
182 294.53 wind 1.0 270 > th dose independent rect. 22 4
183 294.53 wind 7.0 270 < th dose independent rect. 2 9
191 295.03 wind 9.0 270 < th dose dependent rect. 22 4
198 295.47 atmosphere 1015.0 270 < th dose independent rect. 23 2
201 295.69 temperature 30.0 90 < th dose independent rect. 4 19
205 295.75 atmosphere 995.0 270 > th dose independent rect. 2 9
206 295.75 atmosphere 1015.0 270 < th dose independent rect. 2 9
207 295.75 temperature 10.0 270 > th dose independent rect. 11 15
211 295.91 wind 1.0 270 > th dose independent rect. 23 2
219 296.08 wind 9.0 270 < th dose independent rect. 11 15
228 296.38 humidity 50.0 270 > th dose independent rect. 16 15
236 296.66 atmosphere 995.0 270 > th dose independent rect. 11 15
237 296.68 wind 9.0 270 < th dose dependent rect. 21 6
258 297.31 humidity 50.0 270 > th dose independent rect. 2 9
267 297.52 wind 1.0 270 > th dose independent rect. 2 20
269 297.63 wind 3.0 30 < th dose dependent rect. 24 4
271 297.67 wind 1.0 270 > th dose independent rect. 3 18
278 297.88 atmosphere 1015.0 270 < th dose independent rect. 22 4
338 298.46 precipitation 0.1 270 < th dose independent rect. 11 15
339 298.46 precipitation 0.1 270 < th dose dependent rect. 11 15
345 298.55 temperature 10.0 10 > th dose dependent rect. 23 6
349 298.59 precipitation 0.1 270 < th dose independent rect. 17 14
350 298.59 precipitation 0.1 270 < th dose dependent rect. 17 14
355 298.88 radiation 40.0 270 < th dose independent rect. 2 20
356 298.89 temperature 15.0 270 > th dose independent rect. 15 7
405 299.61 temperature 15.0 270 > th dose independent rect. 17 14
407 299.66 temperature 10.0 270 > th dose independent rect. 7 10
408 299.66 atmosphere 1015.0 270 < th dose independent rect. 7 10
410 299.66 radiation 40.0 270 < th dose independent rect. 17 14
414 299.69 radiation 30.0 270 < th dose independent rect. 15 7
416 299.70 wind 9.0 270 < th dose independent rect. 17 14
449 300.04 precipitation 0.1 270 < th dose independent rect. 7 10
450 300.04 precipitation 0.1 270 < th dose dependent rect. 7 10
470 300.30 wind 9.0 270 < th dose independent rect. 7 10
473 300.34 wind 9.0 270 < th dose independent rect. 22 17
495 300.37 radiation 40.0 270 < th dose dependent rect. 17 14
503 300.57 temperature 10.0 270 > th dose independent rect. 22 17
506 300.63 radiation 20.0 270 < th dose independent rect. 16 17
515 300.74 atmosphere 995.0 270 > th dose independent rect. 22 17
517 300.82 wind 9.0 270 < th dose independent rect. 15 7
533 301.11 atmosphere 995.0 90 > th dose independent rect. 4 19
548 301.39 wind 1.0 270 > th dose independent rect. 15 7
553 301.46 radiation 40.0 270 < th dose dependent rect. 16 17
556 301.49 precipitation 0.1 270 < th dose independent rect. 15 7
558 301.49 precipitation 0.1 270 < th dose dependent rect. 15 7
585 301.64 temperature 15.0 270 > th dose independent rect. 16 5
588 301.68 atmosphere 1015.0 270 < th dose dependent rect. 17 4
597 301.78 humidity 90.0 10 > th dose dependent rect. 2 1
603 301.87 atmosphere 1015.0 270 < th dose independent rect. 15 7
609 301.94 radiation 20.0 270 < th dose independent rect. 16 5
615 302.02 radiation 40.0 270 < th dose dependent rect. 15 6
617 302.03 radiation 1.0 270 < th dose independent rect. 3 18
625 302.13 radiation 1.0 270 < th dose dependent rect. 3 18
638 302.38 radiation 1.0 90 < th dose dependent rect. 23 12
642 302.40 radiation 1.0 90 < th dose dependent rect. 23 17
644 302.44 radiation 1.0 90 < th dose dependent rect. 23 9
655 302.59 wind 9.0 270 < th dose independent rect. 21 19
658 302.63 atmosphere 995.0 270 > th dose independent rect. 7 10
667 302.74 temperature 15.0 10 > th dose independent rect. 3 23
669 302.76 wind 9.0 270 < th dose independent rect. 16 5
676 302.80 radiation 40.0 270 < th dose independent rect. 16 5
677 302.80 temperature 10.0 270 > th dose independent rect. 21 19
686 302.86 atmosphere 995.0 270 > th dose independent rect. 21 19
688 302.88 atmosphere 1015.0 270 < th dose independent rect. 16 5
693 302.92 wind 1.0 270 > th dose independent rect. 16 5
702 303.07 precipitation 0.1 270 < th dose independent rect. 22 17
703 303.07 precipitation 0.1 270 < th dose dependent rect. 22 17
721 303.23 radiation 1.0 10 < th dose dependent rect. 23 7
722 303.24 precipitation 0.1 270 < th dose independent rect. 16 5
725 303.24 precipitation 0.1 270 < th dose dependent rect. 16 5
733 303.32 radiation 1.0 10 < th dose dependent rect. 23 17
767 303.64 radiation 1.0 10 < th dose dependent rect. 23 9
849 304.16 atmosphere 1000.0 10 > th dose independent rect. 2 1
853 304.18 atmosphere 995.0 10 > th dose dependent rect. 24 4
855 304.19 atmosphere 1000.0 10 > th dose independent rect. 24 4
875 304.35 humidity 90.0 10 > th dose independent rect. 2 1
899 304.46 radiation 1.0 10 < th dose independent rect. 23 7
927 304.53 humidity 80.0 10 > th dose independent rect. 23 6
936 304.56 atmosphere 1015.0 10 < th dose dependent rect. 2 1
945 304.62 wind 9.0 10 < th dose independent rect. 2 1
946 304.62 temperature 10.0 10 > th dose independent rect. 2 1
948 304.62 temperature 30.0 10 < th dose independent rect. 2 1
949 304.62 humidity 50.0 10 > th dose independent rect. 2 1
953 304.62 atmosphere 1010.0 10 < th dose independent rect. 2 1
955 304.62 radiation 1.0 10 < th dose independent rect. 2 1
960 304.62 precipitation 0.1 10 < th dose independent rect. 2 1
962 304.62 radiation 1.0 10 < th dose dependent rect. 2 1
967 304.62 precipitation 0.1 10 < th dose dependent rect. 2 1
976 304.68 wind 5.0 10 < th dose independent rect. 2 1
979 304.70 temperature 10.0 10 > th dose dependent rect. 2 1
982 304.71 radiation 1.0 10 < th dose independent rect. 23 17
992 304.73 wind 9.0 10 < th dose dependent rect. 2 1