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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0178200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Monosaccharide transporter 3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.27 (0.0324) R2 : 0.0236
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.227 (0.0682) R2dN8 : 0.0305 R2N8 : 0.0236
σ : 0.61
deviance : 170.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
158.93 0.592 3.26 -0.243 0.603 -0.477 -0.767 0.195 0.207 10.2 8.176 11 -- --
158.92 0.587 3.25 -0.234 0.595 -0.472 -0.556 -- 0.218 10.2 8.18 13 -- --
159.9 0.593 3.26 -0.234 0.512 -0.379 -- -0.366 0.199 9.76 8.176 11 -- --
160.17 0.589 3.26 -0.253 0.583 -0.451 -- -- 0.213 10.1 8.18 13 -- --
167.24 0.606 3.27 -0.209 -- -0.101 -- -0.436 0.206 -- 8.176 11 -- --
165.61 0.603 3.27 -0.234 0.276 -- 0.0809 -- 0.196 6.06 -- -- -- --
165.62 0.603 3.27 -0.233 0.277 -- -- -- 0.196 6.21 -- -- -- --
167.96 0.604 3.27 -0.214 -- -0.15 -- -- 0.204 -- 20.82 14 -- --
161.97 0.593 3.26 -- 0.58 -0.44 -- -- 0.232 10 8.18 13 -- --
169.6 0.609 3.27 -0.226 -- -- -- -- 0.202 -- -- -- -- --
167.05 0.605 3.26 -- 0.274 -- -- -- 0.221 6.26 -- -- -- --
168.81 0.607 3.27 -- -- -0.152 -- -- 0.217 -- 15.96 9 -- --
170.94 0.61 3.27 -- -- -- -- -- 0.227 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 150.73 humidity 90.0 90 < th dose independent rect. 3 2
4 151.74 humidity 90.0 10 < th dose dependent rect. 3 2
6 152.60 humidity 90.0 90 < th dose dependent rect. 3 2
31 153.86 atmosphere 1005.0 90 > th dose dependent rect. 3 1
35 155.01 humidity 80.0 90 < th dose dependent rect. 24 3
36 155.05 humidity 80.0 90 < th dose independent rect. 24 3
37 155.07 radiation 1.0 10 < th dose independent rect. 13 1
47 155.07 radiation 1.0 10 < th dose dependent rect. 13 1
50 155.07 temperature 20.0 30 < th dose dependent rect. 12 2
62 155.09 temperature 20.0 30 < th dose independent rect. 12 2
83 155.11 humidity 80.0 90 < th dose dependent rect. 24 5
100 155.14 humidity 80.0 90 < th dose independent rect. 24 5
105 155.23 atmosphere 1005.0 10 > th dose dependent rect. 3 2
137 156.13 atmosphere 1005.0 10 > th dose independent rect. 3 14
138 156.15 atmosphere 995.0 10 > th dose dependent rect. 3 18
144 156.20 atmosphere 1005.0 10 > th dose independent rect. 3 9
162 156.98 atmosphere 1005.0 30 > th dose independent rect. 3 11
173 157.21 atmosphere 1005.0 30 > th dose independent rect. 3 2
176 157.25 atmosphere 1005.0 10 > th dose independent rect. 3 18
188 157.42 radiation 20.0 10 < th dose dependent rect. 13 20
190 157.47 atmosphere 995.0 30 > th dose dependent rect. 3 15
194 157.52 atmosphere 995.0 270 > th dose dependent rect. 24 20
198 157.61 precipitation 0.1 10 < th dose independent rect. 24 14
200 157.61 precipitation 0.1 10 < th dose dependent rect. 24 14
203 157.66 atmosphere 1005.0 270 > th dose independent rect. 24 9
205 157.71 atmosphere 1005.0 270 > th dose independent rect. 24 15
240 157.98 atmosphere 1005.0 30 > th dose independent rect. 3 6
252 158.05 atmosphere 1015.0 90 < th dose independent rect. 11 16
262 158.11 radiation 20.0 10 < th dose dependent rect. 15 18
282 158.24 radiation 10.0 10 < th dose independent rect. 14 19
285 158.26 atmosphere 1005.0 720 > th dose independent rect. 3 1
316 158.40 wind 1.0 30 > th dose independent rect. 24 14
326 158.45 atmosphere 1005.0 10 > th dose independent sin 4 NA
328 158.45 atmosphere 995.0 10 > th dose dependent rect. 3 9
341 158.54 atmosphere 995.0 90 > th dose dependent rect. 3 8
342 158.54 humidity 80.0 90 > th dose dependent rect. 3 21
362 158.61 atmosphere 1015.0 10 < th dose dependent rect. 7 20
369 158.62 atmosphere 1015.0 90 < th dose dependent rect. 6 21
374 158.66 atmosphere 1005.0 270 > th dose independent sin 6 NA
379 158.67 atmosphere 1015.0 270 < th dose dependent rect. 20 17
390 158.72 radiation 20.0 10 < th dose dependent rect. 3 23
393 158.73 atmosphere 1015.0 90 < th dose independent rect. 5 23
404 158.75 atmosphere 1015.0 10 < th dose independent rect. 12 15
410 158.76 atmosphere 995.0 270 > th dose dependent rect. 24 9
420 158.81 atmosphere 1005.0 90 < th dose independent rect. 21 18
428 158.83 atmosphere 1005.0 90 < th dose independent rect. 23 16
430 158.83 radiation 20.0 10 < th dose dependent rect. 3 21
435 158.85 atmosphere 1005.0 10 < th dose independent rect. 22 19
448 158.87 atmosphere 1015.0 10 < th dose dependent rect. 22 16
458 158.89 atmosphere 1015.0 90 < th dose dependent rect. 6 9
471 158.94 humidity 90.0 90 < th dose independent rect. 23 16
476 158.95 radiation 30.0 10 < th dose dependent rect. 3 6
477 158.96 radiation 10.0 10 < th dose independent rect. 3 6
501 159.00 radiation 10.0 10 > th dose independent rect. 12 20
507 159.01 radiation 30.0 10 < th dose dependent rect. 3 11
519 159.03 atmosphere 1005.0 720 > th dose independent rect. 21 11
535 159.05 wind 1.0 30 > th dose independent rect. 1 20
560 159.08 humidity 80.0 90 > th dose dependent rect. 21 20
568 159.09 atmosphere 1000.0 30 > th dose dependent rect. 3 6
575 159.10 radiation 10.0 10 > th dose independent rect. 9 23
582 159.11 radiation 40.0 10 < th dose dependent rect. 3 18
586 159.12 radiation 20.0 90 < th dose independent rect. 14 10
602 159.14 radiation 20.0 30 < th dose independent rect. 13 8
650 159.20 atmosphere 1000.0 270 > th dose independent rect. 23 22
656 159.21 radiation 10.0 90 < th dose dependent rect. 3 5
697 159.28 radiation 30.0 30 < th dose independent rect. 3 18
708 159.29 humidity 50.0 90 > th dose dependent rect. 21 14
714 159.30 radiation 40.0 10 < th dose dependent rect. 15 9
733 159.32 atmosphere 1005.0 10 > th dose independent rect. 3 4
739 159.33 radiation 30.0 10 < th dose dependent rect. 3 8
751 159.35 radiation 40.0 1440 < th dose independent rect. 16 9
780 159.38 radiation 10.0 10 < th dose independent rect. 3 21
781 159.38 humidity 60.0 90 > th dose dependent rect. 21 6
793 159.39 humidity 80.0 10 > th dose independent rect. 3 13
809 159.41 wind 1.0 90 > th dose independent rect. 23 22
827 159.44 wind 7.0 30 < th dose independent rect. 14 10
893 159.51 atmosphere 995.0 30 > th dose independent rect. 14 10
900 159.52 humidity 80.0 10 > th dose independent rect. 3 11
902 159.52 atmosphere 1015.0 10 < th dose dependent rect. 6 9
904 159.52 atmosphere 1015.0 10 < th dose dependent rect. 9 18
908 159.53 atmosphere 1015.0 90 < th dose independent rect. 21 6
913 159.53 radiation 10.0 43200 < th dose dependent rect. 22 4
927 159.55 precipitation 0.1 10 < th dose independent rect. 14 10
928 159.55 radiation 20.0 10 < th dose independent rect. 3 11
933 159.55 precipitation 0.1 10 < th dose dependent rect. 14 10
942 159.56 atmosphere 1000.0 90 > th dose independent rect. 21 14
951 159.57 radiation 1.0 90 < th dose independent rect. 16 11
983 159.59 radiation 10.0 43200 < th dose dependent rect. 22 6
986 159.59 radiation 1.0 90 < th dose dependent rect. 16 11
996 159.60 atmosphere 1015.0 90 < th dose independent rect. 6 21
997 159.60 wind 9.0 10 < th dose dependent rect. 21 6