Os08g0169100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0169100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.68 | 0.478 | 3.49 | 0.618 | 0.181 | 0.826 | 0.42 | -2.73 | 0.154 | 7.34 | 24.57 | 714 | -- | -- |
| 108.06 | 0.484 | 3.56 | 0.245 | 0.197 | 1.8 | -0.245 | -- | -0.0101 | 8.27 | 19.74 | 713 | -- | -- |
| 103.93 | 0.475 | 3.5 | 0.555 | 0.201 | 0.857 | -- | -2.45 | 0.119 | 7.61 | 23.63 | 746 | -- | -- |
| 107.95 | 0.484 | 3.56 | 0.223 | 0.212 | 1.8 | -- | -- | -0.0132 | 7.13 | 19.73 | 746 | -- | -- |
| 105.58 | 0.479 | 3.49 | 0.65 | -- | 0.935 | -- | -2.59 | 0.19 | -- | 25.74 | 703 | -- | -- |
| 130.33 | 0.535 | 3.59 | -0.122 | 0.28 | -- | -0.402 | -- | -0.155 | 8.96 | -- | -- | -- | -- |
| 130.84 | 0.536 | 3.59 | -0.137 | 0.285 | -- | -- | -- | -0.156 | 8.6 | -- | -- | -- | -- |
| 110.18 | 0.489 | 3.57 | 0.24 | -- | 1.84 | -- | -- | -0.0025 | -- | 19.9 | 693 | -- | -- |
| 109.08 | 0.486 | 3.57 | -- | 0.216 | 1.7 | -- | -- | -0.0487 | 7.28 | 19.55 | 713 | -- | -- |
| 135.42 | 0.544 | 3.6 | -0.136 | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
| 131.33 | 0.536 | 3.59 | -- | 0.285 | -- | -- | -- | -0.141 | 8.63 | -- | -- | -- | -- |
| 111.48 | 0.492 | 3.57 | -- | -- | 1.72 | -- | -- | -0.0406 | -- | 19.76 | 687 | -- | -- |
| 135.91 | 0.544 | 3.6 | -- | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 20 |
| 3 | 102.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 26 | 103.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 44 | 103.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 16 |
| 59 | 103.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 73 | 103.72 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 85 | 103.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 9 |
| 98 | 103.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 111 | 104.09 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 156 | 104.31 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 201 | 104.55 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 214 | 104.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 245 | 104.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 248 | 104.72 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 254 | 104.74 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 269 | 104.80 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 335 | 104.99 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 372 | 105.12 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 429 | 105.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 9 |
| 432 | 105.30 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 11 |
| 435 | 105.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 6 |
| 478 | 105.42 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 490 | 105.44 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 21 |
| 511 | 105.48 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 543 | 105.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 646 | 105.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 651 | 105.78 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 680 | 105.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 688 | 105.83 | temperature | 25 | 1440 | < th | dose dependent | sin | 6 | NA |
| 732 | 105.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 753 | 105.92 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 23 |
| 757 | 105.93 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |