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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0168700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.01 (0.0259) R2 : 0.327
β1 : -0.311 (0.0949) R2dD : 0.0136 R2D : 0.0108
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.49 (0.34) R2dE : 0.153 R2E : 0.0858
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -15.7 (1.29) R2dD*E : 0.231 R2D*E : 0.163
γ1 : -0.0642 (0.0555) R2dN8 : 0.00109 R2N8 : -0.00471
σ : 0.485
deviance : 108.35
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_____
C
peak time of C : --
E
wheather : humidity
threshold : 90.57
memory length : 51
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.03
open length of G : 1.33

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
108.45 0.489 3.01 -0.25 0.119 3.6 -0.199 -15.8 -0.0239 14.1 91.14 55 2.08 1.45
138.49 0.548 3.03 -0.207 0.0906 2.49 -0.187 -- -0.106 13.2 89.79 67 2.05 0.917
107.59 0.483 3.01 -0.255 0.134 3.46 -- -15.4 -0.0364 14.3 90.98 51 2.03 1.38
137.62 0.546 3.03 -0.257 0.114 2.6 -- -- -0.0789 14.2 88.92 65 2.04 0.915
108.35 0.485 3.01 -0.311 -- 3.49 -- -15.7 -0.0642 -- 90.57 51 2.03 1.33
157.79 0.589 3 -0.254 0.0471 -- -0.706 -- 0.00291 5.61 -- -- -- --
158.98 0.59 3 -0.256 0.0494 -- -- -- 0.00617 7.53 -- -- -- --
138.42 0.548 3.03 -0.25 -- 2.44 -- -- -0.0693 -- 88.93 65 2.05 0.917
139.14 0.549 3.02 -- 0.13 2.54 -- -- -0.0459 14.4 88.94 65 2.05 0.909
159.11 0.589 3 -0.256 -- -- -- -- 0.00694 -- -- -- -- --
160.72 0.593 3 -- 0.0474 -- -- -- 0.0347 7.89 -- -- -- --
140.02 0.551 3.02 -- -- 2.47 -- -- -0.0343 -- 88.91 65 2.05 0.914
160.84 0.592 3 -- -- -- -- -- 0.0353 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 114.69 humidity 90.0 90 < th dose independent rect. 2 2
3 117.27 humidity 90.0 90 < th dose dependent rect. 2 2
14 118.37 humidity 90.0 10 < th dose dependent rect. 3 1
15 118.41 humidity 90.0 10 < th dose independent rect. 3 1
29 122.06 atmosphere 1005.0 30 > th dose dependent rect. 2 2
91 134.07 atmosphere 1005.0 30 > th dose independent rect. 2 2
114 137.38 temperature 20.0 10 < th dose dependent rect. 3 1
153 140.52 wind 5.0 90 < th dose independent rect. 2 1
162 140.70 temperature 30.0 90 < th dose dependent rect. 2 1
167 140.91 temperature 20.0 90 < th dose independent rect. 2 1
176 141.26 wind 1.0 90 > th dose independent rect. 2 1
179 141.29 wind 9.0 90 < th dose dependent rect. 2 1
185 141.56 precipitation 0.1 90 < th dose independent rect. 3 23
186 141.56 precipitation 0.1 90 < th dose dependent rect. 3 23
188 141.59 precipitation 0.1 90 < th dose independent rect. 2 1
189 141.59 precipitation 0.1 90 < th dose dependent rect. 2 1
192 141.61 temperature 10.0 90 > th dose independent rect. 2 1
194 141.61 temperature 30.0 90 < th dose independent rect. 2 1
195 141.61 humidity 50.0 90 > th dose independent rect. 2 1
199 141.61 atmosphere 1010.0 90 < th dose independent rect. 2 1
201 141.61 radiation 1.0 90 < th dose independent rect. 2 1
206 141.61 temperature 10.0 90 > th dose independent rect. 3 23
207 141.61 atmosphere 1000.0 90 > th dose independent rect. 3 23
208 141.61 radiation 1.0 90 < th dose dependent rect. 2 1
249 142.95 temperature 30.0 10 < th dose dependent rect. 2 2
263 143.48 wind 9.0 90 < th dose independent rect. 3 23
273 143.89 temperature 10.0 90 > th dose dependent rect. 2 1
278 144.09 precipitation 0.1 10 < th dose independent rect. 2 2
279 144.09 precipitation 0.1 10 < th dose dependent rect. 2 2
289 144.32 temperature 10.0 30 > th dose dependent rect. 4 22
298 144.40 humidity 80.0 10 > th dose independent rect. 2 2
340 144.48 precipitation 0.1 10 < th dose independent rect. 4 22
341 144.48 precipitation 0.1 10 < th dose dependent rect. 4 22
364 145.03 wind 9.0 1440 < th dose independent rect. 3 2
365 145.03 temperature 10.0 1440 > th dose independent rect. 3 2
368 145.03 temperature 30.0 1440 < th dose independent rect. 3 2
372 145.03 humidity 50.0 1440 > th dose independent rect. 3 2
381 145.03 atmosphere 995.0 1440 > th dose independent rect. 3 2
382 145.03 radiation 20.0 1440 < th dose independent rect. 3 2
394 145.03 temperature 10.0 1440 > th dose independent rect. 5 22
405 145.39 temperature 20.0 10 < th dose dependent rect. 24 5
468 145.96 temperature 20.0 10 < th dose dependent rect. 24 8
470 145.97 temperature 20.0 270 < th dose independent rect. 24 4
473 146.04 humidity 50.0 90 > th dose dependent rect. 2 1
498 146.30 humidity 50.0 10 > th dose independent rect. 4 22
524 146.84 radiation 1.0 43200 < th dose dependent rect. 3 1
595 147.40 radiation 1.0 1440 < th dose independent rect. 3 1
619 147.40 radiation 1.0 1440 < th dose dependent rect. 3 1
629 147.42 temperature 25.0 90 > th dose independent rect. 2 1
631 147.42 temperature 25.0 90 > th dose dependent rect. 2 1
649 147.58 humidity 50.0 10 > th dose dependent rect. 2 2
658 147.64 temperature 10.0 720 > th dose dependent rect. 3 4
682 147.77 humidity 80.0 30 > th dose dependent rect. 2 1
713 147.80 atmosphere 1015.0 90 < th dose dependent rect. 2 1
749 148.05 temperature 30.0 10 < th dose dependent rect. 2 10
790 148.14 atmosphere 995.0 30 > th dose dependent rect. 18 10
798 148.18 temperature 30.0 720 < th dose dependent rect. 1 2
799 148.20 atmosphere 1015.0 30 < th dose independent rect. 4 22
809 148.29 wind 1.0 30 > th dose independent rect. 4 22
811 148.30 precipitation 0.1 90 < th dose independent rect. 12 13
813 148.30 precipitation 0.1 90 < th dose dependent rect. 12 13
840 148.44 precipitation 0.1 720 < th dose independent rect. 13 18
842 148.44 precipitation 0.1 720 < th dose dependent rect. 13 18
885 148.55 wind 9.0 720 < th dose independent rect. 16 11
886 148.55 precipitation 0.1 720 < th dose independent rect. 3 22
887 148.55 precipitation 0.1 720 < th dose dependent rect. 3 22
893 148.58 precipitation 0.1 720 < th dose independent rect. 4 11
894 148.58 radiation 40.0 30 < th dose independent rect. 4 22
896 148.58 precipitation 0.1 720 < th dose dependent rect. 4 11
898 148.60 humidity 50.0 720 > th dose independent rect. 16 11
900 148.64 temperature 20.0 10 < th dose independent rect. 3 9
907 148.69 temperature 30.0 30 < th dose independent rect. 4 22
909 148.70 precipitation 0.1 720 < th dose independent rect. 3 13
911 148.70 precipitation 0.1 720 < th dose dependent rect. 3 13
919 148.73 atmosphere 1015.0 720 < th dose independent rect. 3 12
920 148.73 temperature 10.0 30 > th dose dependent rect. 4 14
923 148.74 temperature 30.0 10 < th dose dependent rect. 2 14
938 148.83 radiation 40.0 720 < th dose independent rect. 15 12
945 148.86 wind 9.0 30 < th dose dependent rect. 4 22
947 148.88 atmosphere 995.0 30 > th dose dependent rect. 15 13
957 148.90 humidity 50.0 720 > th dose independent rect. 15 13
983 148.99 temperature 15.0 720 > th dose independent rect. 12 3