Os08g0168000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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Os08g0168000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 480.58 | 1.03 | 3.1 | -0.344 | 0.184 | 3.24 | -0.339 | 1.04 | 0.347 | 10 | 9.083 | 1188 | -- | -- |
| 475.94 | 1.02 | 3.04 | -0.445 | 0.204 | 3.7 | -0.312 | -- | 0.356 | 10.3 | 10.4 | 907 | -- | -- |
| 481.02 | 1.02 | 3.1 | -0.353 | 0.183 | 3.28 | -- | 1.27 | 0.346 | 10.1 | 9.067 | 1188 | -- | -- |
| 475.22 | 1.02 | 3.1 | -0.511 | 0.241 | 3.52 | -- | -- | 0.306 | 9.83 | 10.5 | 908 | -- | -- |
| 483.1 | 1.02 | 3.1 | -0.356 | -- | 3.27 | -- | 1.31 | 0.344 | -- | 9 | 1188 | -- | -- |
| 553.34 | 1.1 | 3.13 | -0.805 | 0.135 | -- | -0.235 | -- | 0.169 | 8.42 | -- | -- | -- | -- |
| 553.5 | 1.1 | 3.13 | -0.811 | 0.134 | -- | -- | -- | 0.169 | 8.9 | -- | -- | -- | -- |
| 478.58 | 1.02 | 3.1 | -0.518 | -- | 3.45 | -- | -- | 0.304 | -- | 10.52 | 909 | -- | -- |
| 481.86 | 1.02 | 3.08 | -- | 0.246 | 3.69 | -- | -- | 0.369 | 9.99 | 10.54 | 908 | -- | -- |
| 554.53 | 1.1 | 3.13 | -0.811 | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
| 570.85 | 1.12 | 3.11 | -- | 0.134 | -- | -- | -- | 0.259 | 9.36 | -- | -- | -- | -- |
| 485.45 | 1.03 | 3.09 | -- | -- | 3.62 | -- | -- | 0.367 | -- | 10.54 | 921 | -- | -- |
| 571.9 | 1.12 | 3.11 | -- | -- | -- | -- | -- | 0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 468.89 | wind | 7 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 3 | 469.54 | wind | 7 | 270 | > th | dose independent | rect. | 21 | 11 |
| 4 | 470.11 | wind | 7 | 270 | > th | dose dependent | rect. | 21 | 8 |
| 7 | 470.25 | wind | 9 | 270 | > th | dose independent | rect. | 21 | 13 |
| 8 | 470.53 | wind | 7 | 270 | > th | dose independent | rect. | 21 | 8 |
| 12 | 472.02 | wind | 9 | 270 | > th | dose independent | rect. | 22 | 4 |
| 20 | 472.02 | wind | 9 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 125 | 479.45 | wind | 7 | 720 | > th | dose dependent | sin | 12 | NA |
| 143 | 479.91 | wind | 9 | 270 | > th | dose independent | rect. | 22 | 1 |
| 155 | 479.91 | wind | 9 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 204 | 480.63 | wind | 9 | 720 | > th | dose independent | rect. | 19 | 4 |
| 234 | 481.30 | wind | 9 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 244 | 481.50 | wind | 9 | 1440 | > th | dose dependent | rect. | 12 | 4 |
| 245 | 481.51 | wind | 9 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 254 | 482.03 | wind | 7 | 720 | > th | dose independent | sin | 12 | NA |
| 273 | 482.58 | wind | 9 | 1440 | > th | dose independent | rect. | 12 | 4 |
| 277 | 482.62 | wind | 9 | 720 | < th | dose independent | sin | 11 | NA |
| 299 | 483.02 | wind | 9 | 1440 | < th | dose independent | rect. | 12 | 4 |
| 318 | 483.40 | wind | 9 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 349 | 484.10 | wind | 7 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 351 | 484.16 | wind | 9 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 357 | 484.34 | wind | 7 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 464 | 486.43 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 503 | 487.37 | wind | 7 | 720 | > th | dose independent | rect. | 15 | 18 |
| 517 | 487.58 | wind | 7 | 720 | > th | dose independent | rect. | 15 | 14 |
| 536 | 488.00 | wind | 9 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 554 | 488.32 | wind | 9 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 558 | 488.38 | wind | 9 | 720 | > th | dose independent | rect. | 15 | 1 |
| 560 | 488.39 | wind | 9 | 1440 | > th | dose independent | rect. | 21 | 20 |
| 586 | 488.50 | wind | 9 | 1440 | > th | dose dependent | rect. | 21 | 19 |
| 601 | 488.63 | wind | 9 | 1440 | < th | dose independent | rect. | 11 | 15 |
| 602 | 488.63 | wind | 9 | 720 | < th | dose independent | rect. | 13 | 16 |
| 607 | 488.68 | wind | 7 | 720 | < th | dose independent | rect. | 17 | 16 |
| 608 | 488.68 | wind | 9 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 617 | 488.77 | wind | 9 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 620 | 488.77 | wind | 9 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 649 | 488.98 | wind | 9 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 684 | 489.15 | wind | 9 | 1440 | < th | dose independent | rect. | 21 | 20 |
| 687 | 489.16 | wind | 9 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 694 | 489.19 | wind | 9 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 709 | 489.26 | wind | 9 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 792 | 489.55 | wind | 9 | 1440 | > th | dose independent | sin | 22 | NA |
| 841 | 489.85 | wind | 9 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 855 | 489.87 | wind | 9 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 872 | 489.96 | wind | 9 | 1440 | < th | dose independent | sin | 21 | NA |
| 887 | 490.03 | wind | 9 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 894 | 490.06 | wind | 9 | 1440 | < th | dose independent | rect. | 1 | 16 |
| 983 | 490.35 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 9 |
| 990 | 490.38 | wind | 9 | 1440 | > th | dose independent | no | NA | NA |