Os08g0167800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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Os08g0167800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 444.37 | 0.99 | 3.5 | -0.885 | 0.644 | -1.45 | -1.55 | -38.9 | -0.0873 | 5.35 | 2.604 | 312 | 3.9 | 0.908 |
| 532.42 | 1.08 | 3.55 | -0.71 | 0.786 | -1.44 | -2.49 | -- | -0.115 | 5.53 | 2.604 | 312 | 3.9 | 0.908 |
| 449.23 | 0.987 | 3.5 | -0.903 | 0.613 | -1.07 | -- | -37.7 | -0.0891 | 5.64 | 2.47 | 310 | 3.88 | 0.934 |
| 547.19 | 1.1 | 3.54 | -0.716 | 0.775 | -1.2 | -- | -- | -0.103 | 5.91 | 2.47 | 310 | 3.88 | 0.934 |
| 468.25 | 1.01 | 3.51 | -0.925 | -- | -0.313 | -- | -35.4 | -0.112 | -- | 2.422 | 311 | 3.83 | 0.767 |
| 534.48 | 1.08 | 3.55 | -0.697 | 0.772 | -- | -2.43 | -- | -0.108 | 5.56 | -- | -- | -- | -- |
| 548.63 | 1.1 | 3.54 | -0.705 | 0.763 | -- | -- | -- | -0.097 | 5.94 | -- | -- | -- | -- |
| 535.29 | 1.08 | 3.61 | -1.04 | -- | 1.52 | -- | -- | -0.297 | -- | -0.5729 | 310 | 3.12 | 1.82 |
| 560.67 | 1.11 | 3.52 | -- | 0.762 | -1.02 | -- | -- | -0.0222 | 5.96 | 2.47 | 310 | 3.88 | 0.934 |
| 578.8 | 1.12 | 3.55 | -0.682 | -- | -- | -- | -- | -0.0794 | -- | -- | -- | -- | -- |
| 561.72 | 1.11 | 3.52 | -- | 0.752 | -- | -- | -- | -0.0185 | 5.99 | -- | -- | -- | -- |
| 483.45 | 1.02 | 3.52 | -- | -- | 7.07 | -- | -- | -0.0641 | -- | 2.678 | 257 | 4.88 | 0.0674 |
| 591.07 | 1.13 | 3.53 | -- | -- | -- | -- | -- | -0.00376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 445.76 | wind | 3.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 2 | 448.35 | wind | 3.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 3 | 448.93 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 4 | 448.96 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 4 | 1 |
| 5 | 449.53 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 8 | 450.46 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 9 | 450.62 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 10 | 450.64 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 4 | 3 |
| 30 | 454.89 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 7 |
| 34 | 454.92 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 39 | 455.03 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 9 |
| 41 | 455.07 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 79 | 458.37 | wind | 5.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 171 | 472.09 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 5 |
| 191 | 472.09 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 211 | 472.12 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 215 | 472.13 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 3 |
| 231 | 473.90 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 263 | 478.01 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 264 | 478.01 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 265 | 478.14 | precipitation | 0.1 | 10 | > th | dose independent | sin | 1 | NA |
| 266 | 478.15 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 1 | NA |
| 269 | 478.46 | precipitation | 0.1 | 270 | < th | dose independent | sin | 8 | NA |
| 271 | 478.46 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 8 | NA |
| 275 | 478.73 | precipitation | 0.1 | 270 | > th | dose independent | sin | 8 | NA |
| 279 | 479.29 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 8 | NA |
| 295 | 480.74 | wind | 5.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 299 | 481.10 | wind | 9.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 302 | 481.10 | wind | 9.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 332 | 481.78 | wind | 5.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 437 | 484.57 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 482 | 485.56 | wind | 5.0 | 270 | < th | dose independent | rect. | 20 | 14 |
| 594 | 486.22 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 595 | 486.22 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 968 | 492.50 | radiation | 10.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 993 | 492.99 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 9 |