Os08g0167600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0167600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 263.81 | 0.763 | 2.99 | 1.29 | 0.133 | -0.762 | -0.651 | 4.45 | 0.0848 | 5.4 | 24.87 | 1310 | -- | -- |
| 270.72 | 0.766 | 3.13 | 0.135 | 0.135 | -0.353 | -0.514 | -- | -0.191 | 5.16 | 22.99 | 2704 | -- | -- |
| 264.8 | 0.758 | 2.99 | 1.28 | 0.13 | -0.752 | -- | 4.34 | 0.0832 | 6.34 | 24.92 | 1330 | -- | -- |
| 270.69 | 0.766 | 3.12 | 0.129 | 0.107 | -0.348 | -- | -- | -0.159 | 6.33 | 22.95 | 6913 | -- | -- |
| 265.03 | 0.758 | 2.99 | 1.3 | -- | -0.766 | -- | 4.57 | 0.087 | -- | 25.07 | 1602 | -- | -- |
| 274.87 | 0.777 | 3.15 | 0.009 | 0.126 | -- | -0.556 | -- | -0.259 | 6.58 | -- | -- | -- | -- |
| 275.54 | 0.777 | 3.14 | 0.00222 | 0.129 | -- | -- | -- | -0.256 | 7.8 | -- | -- | -- | -- |
| 271.38 | 0.767 | 3.13 | 0.165 | -- | -0.368 | -- | -- | -0.164 | -- | 22.99 | 6401 | -- | -- |
| 271.18 | 0.767 | 3.13 | -- | 0.136 | -0.309 | -- | -- | -0.191 | 6.8 | 24.41 | 6916 | -- | -- |
| 276.44 | 0.777 | 3.15 | 0.00376 | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
| 275.54 | 0.776 | 3.14 | -- | 0.129 | -- | -- | -- | -0.256 | 7.8 | -- | -- | -- | -- |
| 272 | 0.768 | 3.13 | -- | -- | -0.322 | -- | -- | -0.196 | -- | 23.5 | 6412 | -- | -- |
| 276.44 | 0.776 | 3.15 | -- | -- | -- | -- | -- | -0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 254.13 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 3 | 257.57 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 6 | 257.65 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 4 |
| 9 | 257.69 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 11 | 257.92 | wind | 3.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 18 | 258.29 | wind | 5.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 24 | 258.40 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 27 | 258.43 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 4 |
| 160 | 259.16 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 183 | 260.06 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 185 | 260.17 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 191 | 260.40 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 6 | NA |
| 192 | 260.42 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 194 | 260.42 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 198 | 260.67 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 232 | 260.75 | atmosphere | 995.0 | 10 | < th | dose independent | sin | 6 | NA |
| 233 | 260.75 | atmosphere | 995.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 234 | 260.75 | atmosphere | 995.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 360 | 260.75 | atmosphere | 995.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 361 | 260.75 | atmosphere | 995.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 487 | 260.77 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 17 |
| 488 | 260.77 | atmosphere | 995.0 | 10 | < th | dose dependent | sin | 6 | NA |
| 490 | 260.77 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 492 | 260.80 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 19 |
| 494 | 260.80 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 525 | 261.09 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 561 | 261.75 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 577 | 262.07 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 656 | 263.40 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 734 | 263.77 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 751 | 263.88 | wind | 1.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 767 | 263.94 | wind | 1.0 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 778 | 264.00 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 780 | 264.00 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 783 | 264.01 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 22 |
| 785 | 264.01 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 786 | 264.01 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 790 | 264.01 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 847 | 264.08 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 958 | 264.22 | wind | 1.0 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 1000 | 264.32 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 1 |