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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0167300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.34 (0.0206) R2 : 0.000226
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0139 (0.0433) R2dN8 : 0.000291 R2N8 : 0.000226
σ : 0.387
deviance : 68.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.99 0.373 3.35 0.212 0.192 0.259 -0.164 1.31 -0.039 6.79 91 5900 -- --
65.31 0.376 3.34 0.129 0.211 0.309 -0.228 -- -0.0572 6.38 88.77 4571 -- --
63.06 0.37 3.35 0.209 0.193 0.249 -- 1.33 -0.0355 6.95 91 5913 -- --
65.4 0.377 3.34 0.117 0.212 0.325 -- -- -0.0685 6.63 91 4573 -- --
64.96 0.375 3.35 0.211 -- 0.251 -- 1.29 -0.0329 -- 89.97 5839 -- --
66.59 0.383 3.33 0.104 0.19 -- -0.191 -- -0.00658 6.67 -- -- -- --
66.67 0.382 3.33 0.101 0.19 -- -- -- -0.00576 6.97 -- -- -- --
67.33 0.382 3.34 0.123 -- 0.32 -- -- -0.0665 -- 91.35 4327 -- --
65.72 0.378 3.35 -- 0.204 0.321 -- -- -0.0763 6.64 89 4529 -- --
68.56 0.387 3.33 0.105 -- -- -- -- -0.00224 -- -- -- -- --
66.94 0.383 3.33 -- 0.191 -- -- -- -0.017 6.93 -- -- -- --
67.65 0.383 3.35 -- -- 0.31 -- -- -0.0676 -- 88 4308 -- --
68.85 0.387 3.34 -- -- -- -- -- -0.0139 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 60.28 atmosphere 995.0 720 > th dose independent rect. 23 16
2 60.38 atmosphere 1000.0 30 > th dose independent rect. 3 23
3 60.39 precipitation 0.1 720 < th dose independent rect. 15 8
4 60.39 precipitation 0.1 720 < th dose dependent rect. 15 8
5 60.40 temperature 10.0 720 > th dose independent rect. 15 8
6 60.40 temperature 10.0 720 > th dose independent rect. 23 16
9 60.54 temperature 10.0 720 > th dose independent rect. 3 8
10 60.54 atmosphere 995.0 720 > th dose independent rect. 3 8
11 60.54 temperature 10.0 720 > th dose independent rect. 11 16
12 60.54 atmosphere 1005.0 10 > th dose dependent rect. 2 2
14 60.58 atmosphere 1005.0 90 > th dose dependent rect. 2 1
15 60.60 atmosphere 1010.0 30 < th dose dependent rect. 2 1
16 60.69 wind 9.0 720 < th dose independent rect. 3 8
17 60.70 temperature 15.0 30 > th dose independent rect. 3 23
20 60.74 wind 1.0 10 < th dose independent rect. 2 1
23 60.77 wind 3.0 10 < th dose dependent rect. 2 1
28 60.81 temperature 25.0 30 < th dose independent rect. 2 1
38 60.83 temperature 10.0 30 > th dose independent rect. 2 1
41 60.83 humidity 50.0 30 > th dose independent rect. 2 1
44 60.83 atmosphere 995.0 30 > th dose independent rect. 2 1
45 60.83 atmosphere 1010.0 30 < th dose independent rect. 2 1
47 60.83 radiation 1.0 30 < th dose independent rect. 2 1
52 60.83 precipitation 0.1 30 < th dose independent rect. 2 1
54 60.83 temperature 30.0 30 < th dose dependent rect. 2 1
57 60.83 radiation 1.0 30 < th dose dependent rect. 2 1
62 60.83 precipitation 0.1 30 < th dose dependent rect. 2 1
64 60.84 temperature 10.0 30 > th dose dependent rect. 2 1
66 60.84 humidity 50.0 30 > th dose dependent rect. 2 1
77 60.89 wind 9.0 30 < th dose independent rect. 3 23
80 60.90 atmosphere 995.0 30 > th dose dependent rect. 2 1
108 60.95 atmosphere 1005.0 30 > th dose independent rect. 2 1
112 60.98 wind 1.0 30 > th dose independent rect. 2 1
116 61.02 precipitation 0.1 720 < th dose independent rect. 11 16
117 61.02 precipitation 0.1 720 < th dose dependent rect. 11 16
120 61.05 humidity 50.0 720 > th dose independent rect. 3 8
123 61.15 atmosphere 1015.0 720 < th dose independent rect. 3 8
128 61.25 radiation 40.0 720 < th dose independent rect. 15 8
129 61.29 humidity 80.0 14400 < th dose dependent rect. 3 6
138 61.51 radiation 1.0 43200 < th dose dependent rect. 3 1
145 61.75 precipitation 0.1 30 < th dose independent rect. 3 23
146 61.75 precipitation 0.1 30 < th dose dependent rect. 3 23
147 61.79 humidity 70.0 14400 > th dose independent rect. 8 1
153 61.92 temperature 25.0 720 > th dose dependent rect. 3 5
161 62.01 radiation 10.0 10 > th dose independent rect. 6 1
187 62.01 radiation 10.0 10 > th dose dependent rect. 6 1
214 62.04 humidity 70.0 14400 > th dose independent rect. 4 5
215 62.04 humidity 70.0 14400 > th dose independent rect. 24 9
224 62.06 humidity 70.0 14400 < th dose independent rect. 8 1
227 62.06 precipitation 0.1 720 < th dose independent rect. 3 8
228 62.06 wind 1.0 14400 < th dose dependent rect. 6 1
229 62.06 precipitation 0.1 720 < th dose dependent rect. 3 8
234 62.13 wind 9.0 720 < th dose independent rect. 15 8
236 62.14 temperature 25.0 720 > th dose independent rect. 3 6
238 62.14 temperature 25.0 720 > th dose dependent rect. 24 9
253 62.25 wind 9.0 1440 < th dose independent rect. 3 1
254 62.25 temperature 10.0 1440 > th dose independent rect. 3 1
257 62.25 temperature 30.0 1440 < th dose independent rect. 3 1
261 62.25 humidity 50.0 1440 > th dose independent rect. 3 1
270 62.25 atmosphere 995.0 1440 > th dose independent rect. 3 1
271 62.25 radiation 1.0 1440 < th dose independent rect. 3 1
291 62.25 temperature 10.0 1440 > th dose independent rect. 4 23
310 62.32 precipitation 0.1 720 < th dose independent rect. 23 16
311 62.32 precipitation 0.1 720 < th dose dependent rect. 23 16
315 62.36 humidity 80.0 14400 < th dose dependent rect. 22 12
321 62.40 humidity 70.0 14400 < th dose independent rect. 6 3
332 62.40 humidity 50.0 30 > th dose independent rect. 3 23
341 62.48 humidity 90.0 90 < th dose independent rect. 2 1
342 62.48 atmosphere 995.0 720 > th dose independent rect. 15 8
343 62.50 atmosphere 995.0 720 > th dose independent rect. 11 16
345 62.51 humidity 70.0 1440 < th dose independent rect. 10 1
350 62.54 wind 9.0 720 < th dose independent rect. 23 16
351 62.55 wind 5.0 14400 < th dose independent rect. 11 1
366 62.60 atmosphere 995.0 720 > th dose independent rect. 7 8
369 62.62 wind 1.0 14400 < th dose independent rect. 6 1
381 62.64 precipitation 0.1 720 < th dose independent rect. 19 8
382 62.64 precipitation 0.1 720 < th dose dependent rect. 19 8
383 62.65 humidity 70.0 4320 > th dose dependent rect. 3 7
393 62.72 humidity 70.0 1440 > th dose independent rect. 10 1
401 62.76 wind 9.0 720 < th dose independent rect. 19 8
405 62.78 wind 5.0 14400 < th dose independent rect. 10 5
407 62.79 wind 1.0 14400 < th dose dependent rect. 4 4
442 62.82 humidity 80.0 4320 > th dose independent rect. 3 10
445 62.82 temperature 25.0 30 > th dose dependent rect. 16 19
448 62.83 humidity 80.0 4320 < th dose independent rect. 3 10
462 62.88 wind 5.0 14400 > th dose independent rect. 10 5
468 62.88 temperature 25.0 30 > th dose dependent rect. 14 21
471 62.89 temperature 10.0 720 > th dose independent rect. 7 8
473 62.89 atmosphere 1015.0 720 < th dose independent rect. 7 8
474 62.89 temperature 10.0 720 > th dose independent rect. 15 16
475 62.89 precipitation 0.1 720 < th dose independent rect. 15 16
480 62.89 precipitation 0.1 720 < th dose dependent rect. 15 16
482 62.90 temperature 10.0 720 > th dose independent rect. 19 8
483 62.90 temperature 30.0 720 < th dose independent rect. 19 8
484 62.90 humidity 50.0 720 > th dose independent rect. 19 8
485 62.90 atmosphere 995.0 720 > th dose independent rect. 19 8
486 62.90 radiation 1.0 720 < th dose independent rect. 19 8
491 62.90 temperature 10.0 720 > th dose independent rect. 3 16
495 62.90 radiation 20.0 720 < th dose dependent rect. 19 8
499 62.90 humidity 50.0 4320 > th dose dependent rect. 23 14
503 62.91 radiation 1.0 720 < th dose dependent rect. 19 8
507 62.92 wind 1.0 14400 < th dose independent rect. 4 4
514 62.93 wind 1.0 14400 > th dose independent rect. 5 2
523 62.94 wind 1.0 14400 > th dose independent rect. 4 4
530 62.95 humidity 90.0 4320 < th dose dependent rect. 23 14
543 62.98 wind 5.0 14400 > th dose independent rect. 11 1
573 63.02 temperature 20.0 720 > th dose dependent rect. 3 1
578 63.03 wind 1.0 720 > th dose independent rect. 15 8
579 63.03 humidity 50.0 4320 > th dose dependent sin 5 NA
582 63.03 humidity 90.0 4320 < th dose dependent rect. 3 10
602 63.05 humidity 90.0 4320 < th dose dependent sin 6 NA
606 63.05 temperature 25.0 30 > th dose dependent rect. 24 11
642 63.08 humidity 90.0 720 > th dose independent rect. 3 1
683 63.11 humidity 50.0 4320 > th dose dependent rect. 11 1
684 63.11 humidity 60.0 14400 < th dose dependent rect. 12 1
708 63.14 wind 5.0 14400 < th dose dependent rect. 10 2
737 63.16 wind 3.0 14400 > th dose dependent rect. 11 1
754 63.18 humidity 90.0 4320 < th dose dependent rect. 11 1
780 63.20 atmosphere 1015.0 720 < th dose independent rect. 3 16
782 63.20 wind 1.0 14400 < th dose dependent rect. 4 7
790 63.21 humidity 70.0 4320 > th dose independent sin 5 NA
806 63.21 temperature 10.0 30 > th dose dependent rect. 3 23
833 63.23 humidity 80.0 4320 < th dose independent sin 4 NA
853 63.23 humidity 80.0 4320 > th dose dependent rect. 7 2
866 63.24 precipitation 0.1 720 < th dose independent rect. 7 8
874 63.24 precipitation 0.1 720 < th dose dependent rect. 7 8
883 63.25 temperature 25.0 720 > th dose independent rect. 8 1
901 63.25 humidity 80.0 720 > th dose dependent rect. 3 1
902 63.25 humidity 50.0 14400 > th dose dependent rect. 8 1
913 63.26 humidity 60.0 14400 < th dose independent rect. 11 1
941 63.27 radiation 10.0 30 > th dose independent rect. 17 15