Os08g0167000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os08g0167000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.31 | 0.491 | 9.76 | 1.18 | 0.941 | -1.58 | -0.365 | 1.72 | 0.697 | 8.48 | 19.3 | 252 | -- | -- |
| 111.39 | 0.492 | 9.8 | 0.903 | 0.876 | -1.52 | -0.705 | -- | 0.61 | 7.99 | 18.05 | 338 | -- | -- |
| 109.72 | 0.488 | 9.76 | 1.18 | 0.94 | -1.59 | -- | 1.8 | 0.701 | 8.49 | 19.36 | 254 | -- | -- |
| 112.35 | 0.494 | 9.8 | 0.864 | 0.895 | -1.52 | -- | -- | 0.607 | 8.12 | 18.1 | 332 | -- | -- |
| 135.2 | 0.542 | 9.73 | 1.59 | -- | -2.15 | -- | 3.11 | 0.874 | -- | 20.97 | 511 | -- | -- |
| 147.1 | 0.569 | 9.85 | 0.5 | 1.33 | -- | -0.447 | -- | 0.348 | 7.06 | -- | -- | -- | -- |
| 147.62 | 0.569 | 9.85 | 0.491 | 1.32 | -- | -- | -- | 0.349 | 7.08 | -- | -- | -- | -- |
| 141.55 | 0.554 | 9.8 | 0.999 | -- | -2.02 | -- | -- | 0.715 | -- | 19.65 | 501 | -- | -- |
| 129.53 | 0.53 | 9.82 | -- | 0.94 | -1.18 | -- | -- | 0.483 | 7.89 | 19.4 | 336 | -- | -- |
| 240.06 | 0.724 | 9.88 | 0.517 | -- | -- | -- | -- | 0.373 | -- | -- | -- | -- | -- |
| 153.98 | 0.58 | 9.86 | -- | 1.33 | -- | -- | -- | 0.294 | 7.05 | -- | -- | -- | -- |
| 165.16 | 0.599 | 9.83 | -- | -- | -1.73 | -- | -- | 0.563 | -- | 20.73 | 480 | -- | -- |
| 247.11 | 0.734 | 9.89 | -- | -- | -- | -- | -- | 0.315 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 21 |
| 26 | 104.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 61 | 106.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 69 | 107.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 20 |
| 75 | 107.38 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 79 | 107.46 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 81 | 107.64 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 86 | 107.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 139 | 108.40 | temperature | 20 | 720 | > th | dose dependent | sin | 11 | NA |
| 144 | 108.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 177 | 108.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 196 | 108.80 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 265 | 109.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 317 | 109.51 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 329 | 109.56 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 331 | 109.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 336 | 109.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 345 | 109.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 346 | 109.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 354 | 109.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 358 | 109.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 444 | 109.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 473 | 110.07 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 534 | 110.32 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 682 | 110.88 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 695 | 110.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 699 | 110.96 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 734 | 111.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 13 |
| 736 | 111.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 772 | 111.23 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 796 | 111.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 9 |