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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0166500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0343) R2 : 0.0015
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0598 (0.0721) R2dN8 : 0.00194 R2N8 : 0.0015
σ : 0.645
deviance : 191.06
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
182.44 0.635 3.02 -0.591 0.15 2.52 0.692 -17.5 -0.016 8.14 30.08 104 -- --
180.52 0.626 2.94 0.154 0.0994 2.95 0.696 -- -0.0274 8.47 35.32 53 -- --
183.8 0.631 3.02 -0.573 0.157 2.51 -- -17.5 -0.0176 7.24 30.08 105 -- --
181.6 0.628 2.94 0.176 0.0943 2.84 -- -- -0.0332 8.36 35.38 57 -- --
185.01 0.634 3.02 -0.543 -- 2.38 -- -17.1 -0.0178 -- 30.1 103 -- --
188.42 0.644 2.94 0.163 0.0984 -- 0.577 -- -0.0405 9.39 -- -- -- --
189.63 0.645 2.94 0.184 0.0963 -- -- -- -0.0398 9.32 -- -- -- --
182.1 0.628 2.94 0.176 -- 2.85 -- -- -0.0323 -- 35.36 57 -- --
182.42 0.629 2.95 -- 0.0954 2.86 -- -- -0.0529 8.23 35.36 56 -- --
190.17 0.644 2.95 0.184 -- -- -- -- -0.0394 -- -- -- -- --
190.53 0.646 2.95 -- 0.0963 -- -- -- -0.0603 9.17 -- -- -- --
182.92 0.63 2.95 -- -- 2.86 -- -- -0.0517 -- 35.37 54 -- --
191.06 0.645 2.95 -- -- -- -- -- -0.0598 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 178.16 wind 1 270 > th dose dependent rect. 6 1
2 178.52 temperature 25 90 < th dose dependent rect. 9 1
12 178.79 humidity 50 720 > th dose dependent rect. 24 8
18 179.93 radiation 10 10 < th dose dependent rect. 12 1
20 180.01 humidity 80 90 < th dose independent rect. 2 2
21 180.01 humidity 90 10 < th dose dependent rect. 3 1
22 180.01 humidity 80 90 < th dose dependent rect. 2 2
23 180.03 humidity 80 720 > th dose independent rect. 24 8
27 180.29 humidity 80 720 < th dose independent rect. 22 12
34 180.49 wind 1 90 < th dose independent rect. 16 2
39 180.52 wind 1 90 < th dose dependent rect. 16 2
43 180.58 temperature 30 90 > th dose dependent rect. 13 2
53 180.78 humidity 90 10 < th dose independent rect. 3 1
56 180.85 wind 3 270 > th dose independent rect. 6 1
59 180.88 humidity 90 720 < th dose dependent rect. 22 11
63 180.98 radiation 40 90 > th dose dependent rect. 8 1
88 181.19 humidity 80 1440 < th dose dependent rect. 24 8
93 181.25 humidity 90 720 < th dose dependent rect. 2 1
97 181.27 temperature 30 10 > th dose independent rect. 10 1
99 181.27 temperature 30 30 > th dose dependent rect. 12 4
101 181.29 humidity 80 1440 > th dose independent rect. 2 1
102 181.29 humidity 90 720 < th dose dependent rect. 1 3
107 181.32 humidity 80 720 < th dose independent rect. 2 2
131 181.43 humidity 90 720 < th dose dependent rect. 22 6
133 181.44 atmosphere 1000 10 > th dose independent rect. 9 1
137 181.45 radiation 40 90 < th dose independent rect. 9 1
140 181.46 radiation 10 30 < th dose independent rect. 11 1
167 181.65 humidity 80 1440 > th dose independent rect. 24 1
197 181.72 temperature 30 90 > th dose dependent rect. 12 23
215 181.82 temperature 30 270 > th dose dependent rect. 17 21
217 181.83 atmosphere 1015 270 < th dose independent rect. 7 23
218 181.83 wind 1 90 > th dose dependent rect. 8 1
224 181.85 temperature 30 90 > th dose dependent rect. 17 23
229 181.88 temperature 30 90 > th dose dependent rect. 12 21
231 181.89 temperature 30 90 > th dose dependent rect. 12 7
248 181.91 wind 3 90 > th dose independent rect. 8 2
258 181.95 humidity 80 90 < th dose independent rect. 2 8
260 181.96 radiation 10 30 > th dose independent rect. 10 23
269 181.99 humidity 90 270 < th dose independent rect. 6 1
273 182.00 wind 1 90 < th dose dependent rect. 10 2
274 182.01 atmosphere 1015 720 < th dose independent rect. 7 15
288 182.09 atmosphere 1015 720 < th dose independent rect. 14 8
296 182.11 humidity 80 720 < th dose independent rect. 22 1
303 182.13 humidity 80 720 < th dose independent rect. 22 6
307 182.14 atmosphere 1010 10 < th dose independent rect. 9 1
376 182.28 humidity 50 720 > th dose dependent sin 9 NA
378 182.29 temperature 25 10 < th dose independent rect. 9 1
381 182.30 temperature 30 90 > th dose dependent sin 23 NA
395 182.33 humidity 80 720 > th dose dependent rect. 24 13
397 182.34 temperature 30 90 < th dose independent rect. 10 22
398 182.34 atmosphere 1015 10 < th dose independent rect. 10 23
445 182.46 humidity 70 720 > th dose dependent rect. 21 11
448 182.47 humidity 80 1440 < th dose independent sin 9 NA
455 182.48 temperature 30 270 > th dose dependent sin 9 NA
462 182.51 humidity 80 1440 < th dose independent rect. 6 1
479 182.56 temperature 30 270 > th dose dependent sin 5 NA
487 182.58 temperature 25 720 > th dose independent rect. 6 1
488 182.58 humidity 80 10 < th dose independent rect. 9 1
496 182.58 humidity 70 720 > th dose dependent rect. 21 8
526 182.61 temperature 30 90 > th dose dependent rect. 10 23
531 182.62 temperature 30 90 > th dose dependent rect. 10 9
551 182.65 temperature 30 90 > th dose dependent no NA NA
552 182.65 temperature 20 720 < th dose dependent rect. 22 1
686 182.67 wind 1 90 > th dose dependent rect. 2 8
703 182.70 atmosphere 1000 90 > th dose independent rect. 12 22
771 182.80 wind 1 90 > th dose dependent rect. 5 5
796 182.84 humidity 80 1440 < th dose dependent rect. 6 1
891 182.92 atmosphere 1015 720 < th dose independent rect. 10 16
908 182.95 humidity 80 1440 > th dose independent rect. 6 1
909 182.95 radiation 10 30 > th dose independent rect. 9 1
916 182.95 humidity 80 720 > th dose dependent rect. 21 16
924 182.97 wind 1 720 < th dose independent rect. 11 5
988 183.02 humidity 60 720 < th dose dependent rect. 13 1
991 183.03 humidity 80 720 > th dose independent sin 8 NA
995 183.03 humidity 90 720 < th dose dependent sin 9 NA