Os08g0165300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0165300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 200.49 | 0.665 | 14.5 | 1.12 | 0.82 | -1.36 | 0.253 | -0.98 | -0.229 | 8.74 | 22.1 | 1500 | -- | -- |
| 202.79 | 0.663 | 14.4 | 1.41 | 0.807 | -1.32 | 0.282 | -- | -0.155 | 8.65 | 22.28 | 1455 | -- | -- |
| 200.69 | 0.66 | 14.5 | 1.13 | 0.816 | -1.36 | -- | -0.975 | -0.229 | 8.8 | 22.11 | 1495 | -- | -- |
| 203.02 | 0.664 | 14.4 | 1.42 | 0.808 | -1.32 | -- | -- | -0.151 | 8.74 | 22.26 | 1455 | -- | -- |
| 225.6 | 0.7 | 14.5 | 1.21 | -- | -1.29 | -- | -0.452 | -0.184 | -- | 22.4 | 820 | -- | -- |
| 268.72 | 0.769 | 14.5 | 0.941 | 0.81 | -- | 0.139 | -- | -0.598 | 8.99 | -- | -- | -- | -- |
| 268.78 | 0.768 | 14.5 | 0.946 | 0.808 | -- | -- | -- | -0.598 | 9.03 | -- | -- | -- | -- |
| 226.34 | 0.701 | 14.5 | 1.36 | -- | -1.29 | -- | -- | -0.149 | -- | 22.36 | 820 | -- | -- |
| 250.34 | 0.737 | 14.5 | -- | 0.747 | -0.975 | -- | -- | -0.403 | 8.39 | 22.4 | 1170 | -- | -- |
| 306.35 | 0.818 | 14.6 | 0.945 | -- | -- | -- | -- | -0.593 | -- | -- | -- | -- | -- |
| 292.37 | 0.8 | 14.6 | -- | 0.81 | -- | -- | -- | -0.703 | 8.95 | -- | -- | -- | -- |
| 272.23 | 0.768 | 14.5 | -- | -- | -1.06 | -- | -- | -0.371 | -- | 22.35 | 786 | -- | -- |
| 329.89 | 0.848 | 14.6 | -- | -- | -- | -- | -- | -0.698 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.72 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 2 | 201.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 3 | 202.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 6 | 204.44 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 12 | 205.07 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 13 | 205.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 20 | 205.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 41 | 206.14 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 51 | 206.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 105 | 207.35 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 187 | 208.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 339 | 209.88 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 345 | 209.95 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 358 | 210.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 361 | 210.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 368 | 210.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 407 | 210.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 483 | 211.23 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 513 | 211.52 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 594 | 212.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 608 | 212.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 615 | 212.45 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 664 | 212.84 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 681 | 212.95 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 752 | 213.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 764 | 213.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 860 | 213.96 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 915 | 214.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 950 | 214.38 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |