Os08g0162800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl-CoA-binding protein 2 (ACBP 2) (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os08g0162800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acyl-CoA-binding protein 2 (ACBP 2) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.74 | 0.344 | 14 | -1.38 | 0.497 | -0.892 | -0.455 | 1.16 | -0.621 | 13.3 | 1010 | 20042 | -- | -- |
| 56.61 | 0.35 | 13.9 | -1.04 | 0.493 | -0.904 | -0.447 | -- | -0.536 | 13.3 | 1010 | 21202 | -- | -- |
| 54.13 | 0.343 | 14 | -1.42 | 0.498 | -0.998 | -- | 1.41 | -0.606 | 13.4 | 1010 | 19840 | -- | -- |
| 57.3 | 0.353 | 13.9 | -1.07 | 0.518 | -0.95 | -- | -- | -0.547 | 13.4 | 1010 | 21199 | -- | -- |
| 69.52 | 0.388 | 14 | -1.46 | -- | -1 | -- | 1.54 | -0.612 | -- | 1010 | 19454 | -- | -- |
| 80.22 | 0.42 | 13.9 | -0.762 | 0.485 | -- | -0.473 | -- | -0.445 | 13.2 | -- | -- | -- | -- |
| 81.12 | 0.422 | 13.9 | -0.778 | 0.487 | -- | -- | -- | -0.447 | 13.3 | -- | -- | -- | -- |
| 73.05 | 0.398 | 13.9 | -1.07 | -- | -0.883 | -- | -- | -0.556 | -- | 1010 | 20297 | -- | -- |
| 84.04 | 0.427 | 13.9 | -- | 0.52 | -0.671 | -- | -- | -0.4 | 13.5 | 1010 | 19469 | -- | -- |
| 95.74 | 0.457 | 13.9 | -0.797 | -- | -- | -- | -- | -0.457 | -- | -- | -- | -- | -- |
| 97.08 | 0.461 | 13.9 | -- | 0.501 | -- | -- | -- | -0.361 | 13.4 | -- | -- | -- | -- |
| 100.3 | 0.466 | 13.9 | -- | -- | -0.653 | -- | -- | -0.404 | -- | 1010 | 19236 | -- | -- |
| 112.51 | 0.495 | 13.9 | -- | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.14 | humidity | 60 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 3 | 51.34 | humidity | 70 | 43200 | < th | dose dependent | rect. | 9 | 11 |
| 8 | 51.36 | humidity | 70 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 16 | 51.37 | humidity | 70 | 43200 | < th | dose dependent | sin | 22 | NA |
| 39 | 51.40 | humidity | 60 | 43200 | < th | dose independent | rect. | 16 | 22 |
| 64 | 51.43 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 65 | 51.43 | humidity | 60 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 126 | 51.53 | humidity | 60 | 43200 | > th | dose independent | sin | 5 | NA |
| 127 | 51.53 | humidity | 60 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 139 | 51.54 | humidity | 60 | 43200 | < th | dose independent | sin | 4 | NA |
| 153 | 51.56 | humidity | 60 | 43200 | > th | dose independent | rect. | 22 | 16 |
| 159 | 51.57 | humidity | 60 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 166 | 51.58 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 189 | 51.60 | humidity | 60 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 198 | 51.61 | humidity | 60 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 234 | 51.65 | humidity | 60 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 278 | 51.70 | humidity | 60 | 43200 | < th | dose independent | no | NA | NA |
| 286 | 51.71 | humidity | 60 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 290 | 51.71 | humidity | 60 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 291 | 51.71 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 321 | 51.74 | humidity | 60 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 333 | 51.75 | humidity | 70 | 43200 | < th | dose dependent | no | NA | NA |
| 343 | 51.76 | humidity | 60 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 366 | 51.79 | humidity | 70 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 410 | 51.85 | humidity | 70 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 411 | 51.86 | humidity | 60 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 436 | 51.89 | humidity | 60 | 43200 | > th | dose independent | no | NA | NA |
| 437 | 51.89 | humidity | 60 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 458 | 51.91 | humidity | 60 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 466 | 51.92 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 471 | 51.93 | humidity | 60 | 43200 | < th | dose independent | sin | 14 | NA |
| 482 | 51.94 | humidity | 60 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 500 | 51.97 | humidity | 50 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 509 | 51.97 | humidity | 60 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 554 | 52.03 | humidity | 60 | 43200 | > th | dose independent | sin | 14 | NA |
| 610 | 52.11 | humidity | 60 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 706 | 52.21 | humidity | 60 | 43200 | > th | dose independent | rect. | 15 | 15 |
| 822 | 52.30 | humidity | 60 | 43200 | > th | dose independent | rect. | 18 | 1 |