Os08g0160600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0160600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.87 | 0.225 | 438 | -4680 | 0.113 | 2e+05 | -0.0344 | -2160000 | -0.0133 | 7.14 | 35.4 | 27 | -- | -- |
| 39073649901.5 | 9210 | -519 | -1960 | 573 | 198000 | 2910 | -- | 97.2 | 2.31 | 34.93 | 7 | -- | -- |
| 22.84 | 0.223 | 438 | -4680 | 0.113 | 2e+05 | -- | -2160000 | -0.00622 | 7.63 | 35.4 | 39 | -- | -- |
| 37663777932.69 | 9040 | 507 | 1170 | 1530 | 194000 | -- | -- | -1010 | 2.23 | 34.91 | 8 | -- | -- |
| 23.52 | 0.226 | 438 | -4680 | -- | 2e+05 | -- | -2160000 | -0.00451 | -- | 35.4 | 39 | -- | -- |
| 31.33 | 0.262 | 3.1 | 0.0424 | 0.109 | -- | -0.000653 | -- | -0.013 | 8.47 | -- | -- | -- | -- |
| 31.33 | 0.262 | 3.1 | 0.0423 | 0.109 | -- | -- | -- | -0.0129 | 8.47 | -- | -- | -- | -- |
| 36902887179.21 | 8950 | 71.7 | 1380 | -- | 192000 | -- | -- | 718 | -- | 35.07 | 50 | -- | -- |
| 35239141145.72 | 8740 | 354 | -- | 7500 | 183000 | -- | -- | 299 | 3.5 | 34.86 | 7 | -- | -- |
| 32 | 0.264 | 3.1 | 0.0429 | -- | -- | -- | -- | -0.0119 | -- | -- | -- | -- | -- |
| 31.38 | 0.262 | 3.1 | -- | 0.109 | -- | -- | -- | -0.0177 | 8.44 | -- | -- | -- | -- |
| 30.6 | 0.258 | 3.1 | -- | -- | 1.05 | -- | -- | -0.0114 | -- | 34.21 | 346 | -- | -- |
| 32.04 | 0.264 | 3.1 | -- | -- | -- | -- | -- | -0.0166 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.01 | temperature | 30 | 30 | > th | dose dependent | rect. | 12 | 2 |
| 3 | 25.04 | radiation | 40 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 77 | 26.44 | humidity | 60 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 85 | 26.94 | radiation | 40 | 30 | > th | dose dependent | sin | 13 | NA |
| 110 | 27.34 | radiation | 40 | 10 | > th | dose independent | rect. | 14 | 1 |
| 188 | 27.85 | temperature | 30 | 30 | > th | dose independent | rect. | 13 | 1 |
| 319 | 28.25 | temperature | 30 | 270 | > th | dose dependent | sin | 8 | NA |
| 384 | 28.42 | humidity | 60 | 90 | < th | dose independent | rect. | 12 | 3 |
| 418 | 28.49 | temperature | 30 | 30 | > th | dose dependent | sin | 0 | NA |
| 463 | 28.57 | temperature | 30 | 90 | > th | dose dependent | sin | 3 | NA |
| 465 | 28.58 | radiation | 40 | 30 | < th | dose independent | sin | 13 | NA |
| 491 | 28.64 | radiation | 40 | 30 | > th | dose independent | sin | 13 | NA |
| 728 | 28.98 | temperature | 30 | 10 | > th | dose dependent | no | NA | NA |
| 972 | 29.08 | temperature | 30 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 978 | 29.12 | wind | 1 | 30 | < th | dose independent | rect. | 13 | 1 |