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Os08g0160000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF783 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0165) R2 : 0.0108
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0773 (0.0347) R2dN8 : 0.0139 R2N8 : 0.0108
σ : 0.31
deviance : 44.13
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.63 0.228 11.9 0.735 0.215 -0.459 0.192 -0.0508 -0.0103 18.3 39.49 73 -- --
23.63 0.226 11.9 0.735 0.216 -0.455 0.195 -- -0.0104 18.3 39.49 72 -- --
23.71 0.227 11.9 0.731 0.215 -0.446 -- -0.0402 -0.0101 18.1 39.5 72 -- --
23.71 0.227 11.9 0.733 0.217 -0.443 -- -- -0.0087 18.1 39.5 72 -- --
26.12 0.238 11.9 0.726 -- -0.469 -- -0.0691 -0.0184 -- 39.49 81 -- --
27.25 0.245 11.9 0.709 0.273 -- -0.0982 -- 0.00778 16 -- -- -- --
27.27 0.245 11.9 0.708 0.273 -- -- -- 0.00724 16 -- -- -- --
26.13 0.238 11.9 0.729 -- -0.464 -- -- -0.0174 -- 39.5 81 -- --
37.43 0.285 11.9 -- 0.208 -0.413 -- -- -0.0853 17.6 40.09 69 -- --
31.33 0.262 11.9 0.697 -- -- -- -- -3.49e-05 -- -- -- -- --
40.47 0.298 11.9 -- 0.259 -- -- -- -0.0716 16.1 -- -- -- --
37.59 0.286 11.9 -- -- -0.353 -- -- -0.117 -- 20.28 147 -- --
44.13 0.31 11.9 -- -- -- -- -- -0.0773 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.21 temperature 10.0 90 > th dose dependent rect. 8 6
3 20.25 temperature 10.0 10 > th dose dependent rect. 9 5
7 20.46 temperature 15.0 90 > th dose independent rect. 8 7
9 20.53 precipitation 0.1 90 < th dose independent rect. 8 7
10 20.53 precipitation 0.1 90 < th dose dependent rect. 8 7
13 20.57 atmosphere 1015.0 90 < th dose independent rect. 8 7
14 20.57 temperature 10.0 90 > th dose independent rect. 15 17
16 20.58 wind 9.0 90 < th dose independent rect. 8 7
17 20.59 wind 1.0 90 > th dose independent rect. 8 7
19 20.62 humidity 50.0 90 > th dose independent rect. 8 7
20 20.63 radiation 1.0 90 > th dose independent rect. 8 7
22 20.67 atmosphere 995.0 90 > th dose independent rect. 8 7
25 20.70 atmosphere 995.0 90 > th dose independent rect. 15 17
26 20.70 temperature 10.0 270 > th dose dependent rect. 9 1
27 20.71 humidity 90.0 90 < th dose independent rect. 8 7
29 20.72 wind 9.0 90 < th dose independent rect. 15 17
30 20.72 radiation 40.0 90 < th dose independent rect. 15 17
31 20.73 radiation 1.0 10 > th dose independent rect. 9 6
34 20.76 precipitation 0.1 90 < th dose independent rect. 15 17
35 20.76 precipitation 0.1 90 < th dose dependent rect. 15 17
40 20.81 wind 5.0 270 < th dose independent rect. 3 3
42 20.82 temperature 10.0 10 > th dose independent rect. 9 6
44 20.82 atmosphere 995.0 10 > th dose independent rect. 9 6
45 20.82 atmosphere 1015.0 10 < th dose independent rect. 9 6
46 20.82 precipitation 0.1 10 < th dose independent rect. 9 6
47 20.82 temperature 10.0 10 > th dose independent rect. 15 18
48 20.82 precipitation 0.1 10 < th dose dependent rect. 9 6
49 20.83 wind 9.0 10 < th dose independent rect. 9 6
51 20.83 humidity 90.0 10 < th dose independent rect. 9 6
57 20.85 temperature 30.0 90 < th dose independent rect. 3 6
71 20.87 wind 9.0 90 < th dose independent rect. 9 18
73 20.88 wind 5.0 90 < th dose independent rect. 3 6
74 20.88 atmosphere 995.0 10 > th dose independent rect. 15 18
101 20.92 wind 9.0 270 < th dose independent rect. 6 21
104 20.93 temperature 10.0 1440 > th dose independent rect. 10 5
109 20.93 temperature 10.0 1440 > th dose independent rect. 15 19
113 20.94 radiation 40.0 90 < th dose independent rect. 4 15
118 20.95 radiation 40.0 90 < th dose independent rect. 3 6
119 20.95 wind 9.0 10 < th dose independent rect. 15 18
122 20.96 humidity 60.0 90 > th dose independent rect. 3 6
124 20.96 wind 7.0 270 < th dose independent rect. 1 7
128 20.97 radiation 1.0 270 > th dose independent rect. 9 1
130 20.97 precipitation 0.1 270 < th dose independent rect. 3 3
134 20.97 precipitation 0.1 270 < th dose dependent rect. 3 3
147 20.99 precipitation 0.1 270 < th dose independent rect. 1 7
149 20.99 precipitation 0.1 270 < th dose dependent rect. 1 7
150 21.00 radiation 30.0 270 < th dose independent rect. 1 7
152 21.01 temperature 15.0 270 > th dose independent rect. 9 1
155 21.01 temperature 10.0 90 > th dose independent rect. 3 6
160 21.01 atmosphere 995.0 90 > th dose independent rect. 3 6
161 21.01 atmosphere 1015.0 90 < th dose independent rect. 3 6
163 21.01 precipitation 0.1 90 < th dose independent rect. 3 6
164 21.01 temperature 10.0 90 > th dose independent rect. 9 18
167 21.01 precipitation 0.1 90 < th dose dependent rect. 3 6
172 21.03 precipitation 0.1 90 < th dose independent rect. 9 18
173 21.03 precipitation 0.1 90 < th dose dependent rect. 9 18
175 21.04 temperature 10.0 270 > th dose independent rect. 3 3
177 21.04 temperature 30.0 270 < th dose independent rect. 3 3
178 21.04 humidity 50.0 270 > th dose independent rect. 3 3
181 21.04 atmosphere 995.0 270 > th dose independent rect. 3 3
182 21.04 atmosphere 1015.0 270 < th dose independent rect. 3 3
183 21.04 radiation 20.0 270 < th dose independent rect. 3 3
189 21.04 temperature 10.0 270 > th dose independent rect. 6 21
192 21.05 temperature 10.0 270 > th dose independent rect. 1 7
194 21.05 temperature 30.0 270 < th dose independent rect. 1 7
195 21.05 humidity 50.0 270 > th dose independent rect. 1 7
198 21.05 atmosphere 995.0 270 > th dose independent rect. 1 7
199 21.05 atmosphere 1015.0 270 < th dose independent rect. 1 7
202 21.06 wind 9.0 270 < th dose independent rect. 7 19
206 21.07 wind 9.0 270 < th dose dependent rect. 3 3
229 21.10 radiation 40.0 270 < th dose dependent rect. 2 6
240 21.13 radiation 1.0 270 > th dose independent rect. 8 3
245 21.13 radiation 40.0 270 < th dose dependent rect. 3 3
249 21.14 temperature 15.0 270 > th dose independent rect. 8 3
252 21.14 wind 9.0 270 < th dose independent rect. 17 10
267 21.15 radiation 10.0 270 < th dose independent rect. 17 10
272 21.15 precipitation 0.1 270 < th dose independent rect. 6 21
274 21.15 radiation 30.0 270 < th dose dependent rect. 17 10
276 21.15 precipitation 0.1 270 < th dose dependent rect. 6 21
292 21.17 temperature 10.0 270 > th dose independent rect. 7 19
301 21.18 radiation 1.0 270 > th dose dependent rect. 9 1
306 21.19 atmosphere 1015.0 90 < th dose independent rect. 15 17
307 21.20 humidity 50.0 270 > th dose independent rect. 9 1
310 21.20 temperature 10.0 270 > th dose independent rect. 17 10
314 21.20 temperature 10.0 270 > th dose independent rect. 3 14
315 21.20 atmosphere 1015.0 270 < th dose independent rect. 3 14
318 21.21 wind 7.0 270 < th dose independent rect. 9 1
319 21.21 precipitation 0.1 270 < th dose independent rect. 9 1
324 21.21 precipitation 0.1 270 < th dose independent rect. 7 19
325 21.21 precipitation 0.1 270 < th dose dependent rect. 9 1
327 21.21 precipitation 0.1 270 < th dose dependent rect. 7 19
331 21.22 precipitation 0.1 270 < th dose independent rect. 3 14
339 21.22 precipitation 0.1 270 < th dose dependent rect. 3 14
346 21.23 atmosphere 1015.0 10 < th dose independent rect. 15 18
355 21.24 humidity 50.0 270 > th dose independent rect. 18 9
362 21.24 humidity 50.0 90 > th dose independent rect. 15 17
372 21.25 radiation 1.0 270 > th dose dependent rect. 8 3
373 21.25 wind 9.0 270 < th dose dependent rect. 2 5
377 21.26 atmosphere 995.0 270 > th dose independent rect. 9 1
378 21.26 atmosphere 1015.0 270 < th dose independent rect. 9 1
384 21.26 temperature 10.0 270 > th dose independent rect. 10 23
422 21.30 atmosphere 995.0 270 > th dose independent rect. 18 9
426 21.31 humidity 50.0 10 > th dose independent rect. 16 17
441 21.32 radiation 1.0 90 > th dose dependent rect. 8 6
472 21.35 wind 9.0 270 < th dose dependent rect. 8 3
500 21.38 humidity 50.0 270 > th dose independent rect. 8 3
502 21.38 precipitation 0.1 270 < th dose independent rect. 17 10
504 21.38 atmosphere 995.0 90 > th dose independent rect. 9 18
510 21.38 precipitation 0.1 270 < th dose dependent rect. 17 10
514 21.39 wind 1.0 270 > th dose independent rect. 1 7
519 21.39 wind 9.0 270 < th dose dependent rect. 7 6
526 21.40 precipitation 0.1 10 < th dose independent rect. 9 18
528 21.40 precipitation 0.1 10 < th dose dependent rect. 9 18
536 21.42 wind 7.0 270 < th dose independent rect. 8 3
541 21.42 wind 1.0 90 > th dose independent rect. 9 18
549 21.43 wind 1.0 270 > th dose independent rect. 9 1
583 21.45 precipitation 0.1 270 < th dose independent rect. 8 3
589 21.45 wind 9.0 10 < th dose independent rect. 9 18
590 21.45 precipitation 0.1 270 < th dose dependent rect. 8 3
607 21.48 atmosphere 995.0 270 > th dose independent rect. 8 3
608 21.48 atmosphere 1015.0 270 < th dose independent rect. 8 3
616 21.48 temperature 10.0 270 > th dose independent rect. 11 21
666 21.52 wind 9.0 270 < th dose dependent rect. 9 1
668 21.52 humidity 50.0 270 > th dose dependent rect. 3 3
672 21.53 temperature 10.0 1440 > th dose independent rect. 4 6
675 21.53 atmosphere 995.0 1440 > th dose independent rect. 4 6
676 21.53 atmosphere 1015.0 1440 < th dose independent rect. 4 6
680 21.53 temperature 10.0 1440 > th dose independent rect. 10 18
684 21.53 precipitation 0.1 270 < th dose independent rect. 11 21
686 21.53 precipitation 0.1 270 < th dose dependent rect. 11 21
687 21.54 wind 1.0 270 > th dose independent rect. 8 3
703 21.55 wind 9.0 270 < th dose independent rect. 3 14
704 21.55 atmosphere 995.0 270 > th dose independent rect. 3 14
806 21.60 atmosphere 995.0 90 > th dose dependent rect. 3 6
812 21.61 temperature 30.0 270 < th dose independent rect. 18 9
840 21.62 wind 1.0 270 > th dose independent rect. 13 18
877 21.64 radiation 40.0 270 < th dose dependent rect. 4 1
904 21.66 atmosphere 995.0 270 > th dose independent rect. 7 19
916 21.67 radiation 40.0 270 < th dose independent rect. 11 21
934 21.68 radiation 1.0 270 < th dose dependent rect. 4 1
951 21.70 radiation 40.0 10 < th dose independent rect. 12 21
954 21.70 atmosphere 995.0 10 > th dose dependent rect. 3 6
973 21.71 temperature 30.0 270 < th dose dependent rect. 3 3
975 21.72 radiation 1.0 270 < th dose independent rect. 4 1
977 21.72 humidity 90.0 270 < th dose independent rect. 9 2
980 21.72 humidity 50.0 90 > th dose independent rect. 9 18
990 21.73 temperature 10.0 90 > th dose dependent rect. 4 4