Os08g0159100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CD9/CD37/CD63 antigen family protein.
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Os08g0159100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CD9/CD37/CD63 antigen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.73 | 0.219 | 12.3 | -0.669 | 0.326 | -0.549 | -0.245 | 0.245 | 0.0606 | 0.757 | 24.59 | 726 | -- | -- |
| 21.71 | 0.217 | 12.3 | -0.62 | 0.353 | -0.592 | -0.318 | -- | 0.0779 | 0.759 | 23.4 | 602 | -- | -- |
| 21.96 | 0.218 | 12.3 | -0.678 | 0.326 | -0.539 | -- | 0.354 | 0.0581 | 0.781 | 24.7 | 733 | -- | -- |
| 22.03 | 0.219 | 12.3 | -0.617 | 0.349 | -0.617 | -- | -- | 0.0812 | 0.875 | 23.29 | 613 | -- | -- |
| 28.01 | 0.246 | 12.3 | -0.65 | -- | -0.558 | -- | 0.373 | 0.0465 | -- | 26.1 | 807 | -- | -- |
| 26.61 | 0.242 | 12.3 | -0.472 | 0.385 | -- | -0.33 | -- | 0.184 | 0.29 | -- | -- | -- | -- |
| 27.07 | 0.244 | 12.3 | -0.459 | 0.386 | -- | -- | -- | 0.185 | 0.393 | -- | -- | -- | -- |
| 27.72 | 0.245 | 12.3 | -0.658 | -- | -0.734 | -- | -- | 0.029 | -- | 26 | 858 | -- | -- |
| 30.88 | 0.259 | 12.3 | -- | 0.373 | -0.352 | -- | -- | 0.191 | 0.666 | 23.37 | 465 | -- | -- |
| 36.44 | 0.282 | 12.3 | -0.446 | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
| 32.63 | 0.267 | 12.3 | -- | 0.379 | -- | -- | -- | 0.236 | 0.331 | -- | -- | -- | -- |
| 37.79 | 0.286 | 12.3 | -- | -- | -0.46 | -- | -- | 0.155 | -- | 25.9 | 828 | -- | -- |
| 41.69 | 0.301 | 12.3 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 12 | 20.88 | temperature | 15 | 30 | > th | dose dependent | sin | 7 | NA |
| 17 | 20.93 | temperature | 30 | 10 | < th | dose dependent | sin | 6 | NA |
| 28 | 21.05 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 7 |
| 31 | 21.07 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 18 |
| 36 | 21.15 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 8 |
| 45 | 21.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 18 | 18 |
| 63 | 21.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 14 |
| 81 | 21.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 17 |
| 82 | 21.46 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 19 |
| 104 | 21.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 131 | 21.60 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 18 |
| 145 | 21.63 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 205 | 21.75 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 20 |
| 212 | 21.76 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 230 | 21.79 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 231 | 21.80 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 243 | 21.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 244 | 21.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 245 | 21.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 246 | 21.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 294 | 21.88 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 18 |
| 388 | 22.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 523 | 22.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 13 |
| 592 | 22.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 596 | 22.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 22 |
| 637 | 22.26 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 22 |
| 638 | 22.26 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 686 | 22.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 9 |
| 700 | 22.31 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 711 | 22.31 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 728 | 22.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 780 | 22.36 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 807 | 22.38 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 2 |
| 878 | 22.43 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 17 |
| 895 | 22.44 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 18 |
| 928 | 22.45 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 946 | 22.47 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 14 |
| 956 | 22.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 14 |