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Os08g0157800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.89 (0.0166) R2 : 0.565
β1 : 1.15 (0.0609) R2dD : 0.354 R2D : 0.243
β2 : 0.601 (0.0434) R2dC : 0.184 R2C : 0.134
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.39 (0.0355) R2dN8 : 0.155 R2N8 : 0.0337
σ : 0.313
deviance : 44.54
__
_____
C
peak time of C : 18.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.63 0.28 8.89 1.18 0.667 -0.584 -0.563 -0.0752 0.395 18.3 68.01 3282 -- --
35.64 0.278 8.89 1.18 0.668 -0.59 -0.576 -- 0.396 18.3 68.04 3280 -- --
36.38 0.281 8.89 1.18 0.664 -0.562 -- -0.221 0.391 18.3 68.35 3284 -- --
36.45 0.281 8.89 1.18 0.664 -0.58 -- -- 0.393 18.2 68.22 3273 -- --
55.75 0.348 8.87 1.07 -- -0.54 -- -0.43 0.394 -- 68 5641 -- --
44 0.311 8.88 1.14 0.603 -- -0.47 -- 0.392 18.3 -- -- -- --
44.54 0.313 8.89 1.15 0.601 -- -- -- 0.39 18.3 -- -- -- --
55.01 0.345 8.86 1.12 -- -0.68 -- -- 0.411 -- 68.16 4161 -- --
50.66 0.332 8.93 -- 0.592 -1.02 -- -- 0.19 18.3 61.25 47520 -- --
63.27 0.372 8.87 1.13 -- -- -- -- 0.377 -- -- -- -- --
79.43 0.417 8.91 -- 0.585 -- -- -- 0.262 18.4 -- -- -- --
68.55 0.386 8.92 -- -- -1.03 -- -- 0.192 -- 63.6 47520 -- --
97.2 0.46 8.9 -- -- -- -- -- 0.252 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.17 temperature 10.0 270 > th dose dependent rect. 20 15
6 30.71 temperature 10.0 270 > th dose dependent rect. 19 6
9 30.86 temperature 15.0 270 > th dose independent rect. 6 19
11 30.89 temperature 15.0 270 > th dose independent rect. 20 15
19 31.24 temperature 15.0 270 > th dose independent rect. 5 8
25 31.41 wind 1.0 270 > th dose independent rect. 1 5
27 31.43 precipitation 0.1 270 < th dose independent rect. 1 5
28 31.43 precipitation 0.1 270 < th dose dependent rect. 1 5
29 31.44 wind 1.0 270 > th dose independent rect. 11 9
37 31.64 wind 5.0 270 < th dose independent rect. 1 5
48 31.76 wind 7.0 270 < th dose independent rect. 5 8
50 31.76 radiation 30.0 270 < th dose dependent rect. 1 6
59 31.79 wind 9.0 270 < th dose independent rect. 6 19
60 31.79 temperature 30.0 270 < th dose dependent rect. 1 4
61 31.80 wind 1.0 270 > th dose independent rect. 13 16
63 31.82 temperature 10.0 270 > th dose independent rect. 1 5
65 31.82 temperature 30.0 270 < th dose independent rect. 1 5
66 31.82 humidity 50.0 270 > th dose independent rect. 1 5
69 31.82 atmosphere 995.0 270 > th dose independent rect. 1 5
70 31.82 atmosphere 1015.0 270 < th dose independent rect. 1 5
71 31.82 radiation 20.0 270 < th dose independent rect. 1 5
74 31.82 wind 9.0 270 < th dose independent rect. 20 15
84 31.86 temperature 10.0 10 > th dose dependent rect. 20 7
85 31.87 precipitation 0.1 270 < th dose independent rect. 2 3
87 31.87 temperature 10.0 270 > th dose independent rect. 11 9
88 31.87 atmosphere 1015.0 270 < th dose independent rect. 11 9
90 31.87 atmosphere 995.0 270 > th dose independent rect. 20 15
92 31.87 precipitation 0.1 270 < th dose dependent rect. 2 3
105 31.90 atmosphere 995.0 270 > th dose independent rect. 6 19
108 31.91 temperature 15.0 10 > th dose dependent rect. 22 15
114 31.97 precipitation 0.1 270 < th dose independent rect. 11 9
115 31.97 precipitation 0.1 270 < th dose dependent rect. 11 9
116 31.98 wind 9.0 270 < th dose independent rect. 11 9
121 32.01 radiation 1.0 270 < th dose dependent rect. 1 10
124 32.02 humidity 50.0 270 > th dose independent rect. 20 15
130 32.05 atmosphere 995.0 270 > th dose independent rect. 18 7
138 32.08 precipitation 0.1 270 < th dose independent rect. 6 19
139 32.08 precipitation 0.1 270 < th dose dependent rect. 6 19
140 32.09 wind 5.0 270 < th dose independent rect. 2 3
141 32.09 radiation 1.0 270 < th dose independent rect. 1 10
154 32.15 temperature 10.0 270 > th dose independent rect. 18 7
155 32.15 humidity 50.0 270 > th dose independent rect. 18 7
156 32.15 radiation 20.0 270 < th dose independent rect. 18 7
159 32.15 temperature 10.0 270 > th dose independent rect. 1 17
160 32.15 atmosphere 1015.0 270 < th dose independent rect. 1 17
161 32.15 precipitation 0.1 270 < th dose independent rect. 1 17
162 32.15 radiation 40.0 270 < th dose dependent rect. 18 7
165 32.15 precipitation 0.1 270 < th dose dependent rect. 1 17
170 32.16 radiation 20.0 270 < th dose dependent rect. 18 7
182 32.19 wind 9.0 270 < th dose independent rect. 18 7
208 32.24 wind 9.0 270 < th dose independent rect. 13 16
214 32.25 radiation 1.0 270 < th dose dependent rect. 2 3
222 32.27 temperature 10.0 270 > th dose independent rect. 2 3
224 32.27 temperature 30.0 270 < th dose independent rect. 2 3
225 32.27 humidity 50.0 270 > th dose independent rect. 2 3
228 32.27 atmosphere 995.0 270 > th dose independent rect. 2 3
229 32.27 atmosphere 1010.0 270 < th dose independent rect. 2 3
231 32.27 radiation 20.0 270 < th dose independent rect. 2 3
238 32.28 precipitation 0.1 270 < th dose independent rect. 5 8
239 32.28 radiation 20.0 270 < th dose dependent rect. 2 3
242 32.28 precipitation 0.1 270 < th dose dependent rect. 5 8
246 32.29 atmosphere 1015.0 270 < th dose independent rect. 6 19
247 32.29 wind 9.0 270 < th dose independent rect. 5 21
248 32.30 radiation 1.0 270 < th dose independent rect. 2 3
252 32.30 atmosphere 995.0 270 > th dose independent rect. 5 8
253 32.30 atmosphere 1015.0 270 < th dose independent rect. 5 8
254 32.30 temperature 10.0 270 > th dose independent rect. 13 16
261 32.32 wind 9.0 270 < th dose independent rect. 1 17
285 32.35 precipitation 0.1 270 < th dose independent rect. 13 16
287 32.35 precipitation 0.1 270 < th dose dependent rect. 13 16
293 32.36 atmosphere 995.0 270 > th dose dependent rect. 1 5
294 32.37 precipitation 0.1 270 < th dose independent rect. 18 7
297 32.37 precipitation 0.1 270 < th dose dependent rect. 18 7
318 32.43 temperature 10.0 270 > th dose dependent rect. 5 7
321 32.44 temperature 30.0 270 < th dose independent rect. 18 7
322 32.44 precipitation 0.1 270 < th dose independent rect. 20 15
327 32.44 precipitation 0.1 270 < th dose dependent rect. 20 15
333 32.46 wind 9.0 270 < th dose dependent rect. 6 19
343 32.48 wind 9.0 90 < th dose dependent rect. 8 19
350 32.50 humidity 50.0 270 > th dose dependent rect. 18 7
387 32.58 temperature 30.0 90 < th dose dependent rect. 3 6
407 32.62 atmosphere 1015.0 270 < th dose independent rect. 18 7
408 32.62 radiation 1.0 270 > th dose independent rect. 5 8
448 32.68 temperature 15.0 90 > th dose independent rect. 20 7
458 32.68 radiation 40.0 90 < th dose dependent rect. 3 6
460 32.68 wind 9.0 90 < th dose dependent rect. 9 17
468 32.70 wind 7.0 10 < th dose independent rect. 9 18
469 32.70 wind 9.0 270 < th dose dependent rect. 1 5
471 32.71 wind 1.0 270 > th dose independent rect. 3 1
494 32.75 precipitation 0.1 90 < th dose independent rect. 20 7
498 32.75 precipitation 0.1 90 < th dose dependent rect. 20 7
500 32.76 humidity 50.0 270 > th dose independent rect. 5 8
503 32.77 temperature 30.0 90 < th dose independent rect. 20 7
504 32.77 humidity 50.0 90 > th dose independent rect. 20 7
507 32.77 atmosphere 995.0 90 > th dose independent rect. 20 7
508 32.77 radiation 1.0 90 < th dose independent rect. 20 7
513 32.77 temperature 10.0 90 > th dose independent rect. 3 17
514 32.77 atmosphere 1015.0 90 < th dose independent rect. 3 17
516 32.77 radiation 1.0 90 < th dose dependent rect. 20 7
522 32.78 wind 9.0 90 < th dose independent rect. 20 7
531 32.81 atmosphere 1015.0 270 < th dose independent rect. 20 15
540 32.82 wind 9.0 270 < th dose dependent rect. 2 3
570 32.86 wind 5.0 90 < th dose independent rect. 3 5
575 32.87 wind 9.0 270 < th dose dependent rect. 6 7
587 32.90 wind 1.0 270 > th dose independent rect. 1 17
590 32.91 precipitation 0.1 10 < th dose independent rect. 3 6
592 32.91 precipitation 0.1 10 < th dose dependent rect. 3 6
711 33.04 precipitation 0.1 90 < th dose independent rect. 3 17
715 33.04 precipitation 0.1 90 < th dose dependent rect. 3 17
730 33.05 humidity 50.0 90 > th dose dependent rect. 20 7
732 33.06 temperature 15.0 10 > th dose independent rect. 9 18
734 33.06 radiation 1.0 270 < th dose dependent sin 3 NA
777 33.12 radiation 40.0 270 < th dose independent rect. 14 15
786 33.13 precipitation 0.1 10 < th dose independent rect. 3 17
790 33.13 precipitation 0.1 10 < th dose dependent rect. 3 17
805 33.15 humidity 50.0 270 > th dose dependent rect. 1 5
806 33.15 wind 9.0 10 < th dose dependent rect. 3 6
821 33.18 wind 5.0 10 < th dose independent rect. 3 6
833 33.19 wind 9.0 90 < th dose dependent rect. 3 5
838 33.20 temperature 15.0 10 > th dose independent rect. 20 7
871 33.24 precipitation 0.1 10 < th dose independent rect. 9 18
873 33.24 precipitation 0.1 10 < th dose dependent rect. 9 18
894 33.26 wind 9.0 90 < th dose independent rect. 3 17
956 33.30 precipitation 0.1 10 < th dose independent rect. 20 7
958 33.30 humidity 50.0 270 > th dose dependent rect. 2 3
959 33.30 precipitation 0.1 10 < th dose dependent rect. 20 7
962 33.31 temperature 10.0 10 > th dose independent rect. 3 6
964 33.31 temperature 30.0 10 < th dose independent rect. 3 6
965 33.31 humidity 50.0 10 > th dose independent rect. 3 6
967 33.31 atmosphere 995.0 10 > th dose independent rect. 3 6
968 33.31 atmosphere 1015.0 10 < th dose independent rect. 3 6