Os08g0157000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitogen-activated protein kinase 4.
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Os08g0157000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mitogen-activated protein kinase 4.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.4 | 0.478 | 6.93 | 0.306 | 1.43 | -0.78 | -0.292 | 0.326 | -0.471 | 3.55 | 0.0001253 | 29 | -- | -- |
| 103.06 | 0.476 | 6.94 | 0.351 | 1.31 | -0.73 | -0.0272 | -- | -0.508 | 3.56 | 0.009229 | 28 | -- | -- |
| 102.39 | 0.475 | 6.94 | 0.34 | 1.32 | -0.742 | -- | 0.323 | -0.512 | 3.51 | 0.0001253 | 29 | -- | -- |
| 103.07 | 0.476 | 6.94 | 0.352 | 1.32 | -0.732 | -- | -- | -0.508 | 3.55 | 0.0001253 | 29 | -- | -- |
| 179.09 | 0.627 | 6.93 | 0.416 | -- | -0.313 | -- | 0.367 | -0.449 | -- | 0.0001253 | 29 | -- | -- |
| 116.28 | 0.506 | 6.91 | 0.418 | 1.19 | -- | -0.525 | -- | -0.452 | 6.18 | -- | -- | -- | -- |
| 116.96 | 0.506 | 6.91 | 0.412 | 1.19 | -- | -- | -- | -0.45 | 6.17 | -- | -- | -- | -- |
| 179.97 | 0.628 | 6.93 | 0.429 | -- | -0.311 | -- | -- | -0.445 | -- | 0.0001253 | 29 | -- | -- |
| 106.31 | 0.483 | 6.95 | -- | 1.34 | -0.761 | -- | -- | -0.549 | 3.46 | 0.0001253 | 29 | -- | -- |
| 190.66 | 0.645 | 6.93 | 0.446 | -- | -- | -- | -- | -0.424 | -- | -- | -- | -- | -- |
| 121.44 | 0.516 | 6.92 | -- | 1.2 | -- | -- | -- | -0.496 | 6.15 | -- | -- | -- | -- |
| 184.83 | 0.635 | 6.94 | -- | -- | -0.316 | -- | -- | -0.492 | -- | 0.0001253 | 29 | -- | -- |
| 195.9 | 0.653 | 6.94 | -- | -- | -- | -- | -- | -0.473 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.85 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 2 | 97.07 | humidity | 70.0 | 30 | > th | dose independent | rect. | 18 | 10 |
| 4 | 97.48 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 6 | 98.03 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 15 | 13 |
| 8 | 98.20 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 7 | 21 |
| 10 | 98.36 | radiation | 1.0 | 30 | > th | dose independent | rect. | 16 | 15 |
| 20 | 98.71 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 10 |
| 21 | 98.73 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 10 |
| 26 | 98.85 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 30 | 98.91 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 18 | 10 |
| 32 | 98.93 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 13 |
| 58 | 99.32 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 72 | 99.48 | radiation | 1.0 | 30 | < th | dose dependent | sin | 13 | NA |
| 73 | 99.60 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 18 | 9 |
| 86 | 99.90 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 15 |
| 87 | 99.90 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 15 |
| 95 | 100.11 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 106 | 100.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 108 | 100.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 113 | 100.25 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 128 | 100.58 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 129 | 100.59 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 141 | 100.80 | temperature | 10.0 | 30 | > th | dose independent | rect. | 18 | 10 |
| 143 | 100.80 | radiation | 20.0 | 30 | < th | dose independent | rect. | 18 | 10 |
| 146 | 100.80 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 14 |
| 148 | 100.80 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 14 |
| 149 | 100.81 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 18 | 10 |
| 152 | 100.84 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 153 | 100.85 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 14 |
| 154 | 100.85 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 155 | 100.85 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 159 | 100.88 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 18 | 9 |
| 160 | 100.88 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 18 | 9 |
| 161 | 100.89 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 14 |
| 162 | 100.91 | radiation | 1.0 | 30 | < th | dose independent | sin | 12 | NA |
| 164 | 100.93 | radiation | 1.0 | 30 | > th | dose independent | sin | 12 | NA |
| 166 | 100.94 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 14 |
| 168 | 100.96 | wind | 9.0 | 30 | < th | dose independent | rect. | 18 | 10 |
| 178 | 101.00 | wind | 9.0 | 30 | < th | dose dependent | rect. | 18 | 10 |
| 205 | 101.13 | temperature | 15.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 239 | 101.42 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 248 | 101.50 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 256 | 101.58 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 259 | 101.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 261 | 101.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 262 | 101.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 265 | 101.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 266 | 101.59 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 268 | 101.59 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 276 | 101.60 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 279 | 101.61 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 280 | 101.61 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 283 | 101.63 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 14 |
| 300 | 101.71 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 14 |
| 320 | 101.94 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 335 | 102.03 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 338 | 102.04 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 342 | 102.08 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 18 | 10 |
| 346 | 102.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 348 | 102.10 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 349 | 102.10 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 352 | 102.10 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 353 | 102.10 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 354 | 102.10 | radiation | 20.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 371 | 102.19 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 400 | 102.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 403 | 102.33 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 407 | 102.33 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 409 | 102.33 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 410 | 102.33 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 422 | 102.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 425 | 102.33 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 430 | 102.37 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 452 | 102.50 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 14 |
| 490 | 102.58 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 496 | 102.64 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 497 | 102.64 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 518 | 102.74 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 539 | 102.84 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 546 | 102.84 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 550 | 102.86 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 21 |
| 551 | 102.86 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 21 |
| 616 | 103.05 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 628 | 103.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 630 | 103.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 651 | 103.17 | temperature | 15.0 | 90 | > th | dose independent | rect. | 7 | 8 |
| 652 | 103.17 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 654 | 103.17 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 16 | 15 |
| 663 | 103.20 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 671 | 103.21 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 679 | 103.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 681 | 103.25 | wind | 7.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 702 | 103.31 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 710 | 103.33 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 716 | 103.35 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 761 | 103.47 | humidity | 60.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 764 | 103.48 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 16 |
| 768 | 103.48 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 774 | 103.50 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 777 | 103.50 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 778 | 103.50 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 781 | 103.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 782 | 103.51 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 786 | 103.51 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 790 | 103.52 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 795 | 103.53 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 18 | 10 |
| 810 | 103.58 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 5 |
| 812 | 103.58 | wind | 7.0 | 90 | < th | dose independent | rect. | 15 | 16 |
| 813 | 103.58 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 16 |
| 815 | 103.58 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 867 | 103.66 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 869 | 103.66 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 874 | 103.67 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 14 |
| 876 | 103.68 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 887 | 103.69 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 907 | 103.72 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 909 | 103.72 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 961 | 103.83 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 8 |
| 964 | 103.83 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 8 |