Os08g0155400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nitrate/chlorate transporter.
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Os08g0155400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nitrate/chlorate transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.95 | 0.332 | 12 | 0.176 | 0.97 | 0.767 | -0.474 | 0.732 | -0.115 | 5.21 | 74.7 | 2699 | -- | -- |
| 50.51 | 0.331 | 12 | 0.0952 | 0.973 | 0.889 | -0.463 | -- | -0.146 | 5.2 | 76 | 2705 | -- | -- |
| 50.5 | 0.331 | 12 | 0.173 | 0.967 | 0.762 | -- | 0.703 | -0.113 | 5.18 | 74.66 | 2693 | -- | -- |
| 51.04 | 0.333 | 12 | 0.0776 | 0.96 | 0.891 | -- | -- | -0.144 | 5.16 | 75.95 | 2706 | -- | -- |
| 98.78 | 0.463 | 12 | 0.189 | -- | 0.928 | -- | 0.668 | -0.0993 | -- | 74 | 2679 | -- | -- |
| 67.65 | 0.386 | 12 | 0.136 | 1.04 | -- | -0.284 | -- | -0.037 | 4.85 | -- | -- | -- | -- |
| 67.86 | 0.386 | 12 | 0.137 | 1.03 | -- | -- | -- | -0.0357 | 4.82 | -- | -- | -- | -- |
| 97.92 | 0.461 | 12 | 0.122 | -- | 1.2 | -- | -- | -0.128 | -- | 76.32 | 2695 | -- | -- |
| 51.2 | 0.333 | 12 | -- | 0.961 | 0.895 | -- | -- | -0.148 | 5.17 | 76 | 2703 | -- | -- |
| 124.45 | 0.521 | 12 | 0.175 | -- | -- | -- | -- | -0.00884 | -- | -- | -- | -- | -- |
| 68.35 | 0.387 | 12 | -- | 1.04 | -- | -- | -- | -0.0509 | 4.82 | -- | -- | -- | -- |
| 98.31 | 0.462 | 12 | -- | -- | 1.2 | -- | -- | -0.141 | -- | 76 | 2695 | -- | -- |
| 125.26 | 0.522 | 12 | -- | -- | -- | -- | -- | -0.0283 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.75 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 2 | 46.80 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 4 | 46.83 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 6 | 46.84 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 13 | 47.00 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 18 | 47.06 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 41 | 47.37 | wind | 5 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 42 | 47.40 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 55 | 47.51 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 7 |
| 113 | 47.88 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 117 | 47.91 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 136 | 47.99 | humidity | 60 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 177 | 48.17 | humidity | 50 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 184 | 48.19 | humidity | 90 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 190 | 48.21 | humidity | 60 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 203 | 48.24 | humidity | 60 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 204 | 48.25 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 272 | 48.44 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 279 | 48.47 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 290 | 48.49 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 379 | 48.65 | humidity | 70 | 14400 | < th | dose independent | sin | 13 | NA |
| 395 | 48.67 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 12 |
| 419 | 48.73 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 480 | 48.84 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 496 | 48.86 | wind | 3 | 43200 | > th | dose independent | sin | 7 | NA |
| 514 | 48.91 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 533 | 48.94 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 579 | 49.02 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 594 | 49.03 | wind | 1 | 43200 | > th | dose dependent | sin | 7 | NA |
| 632 | 49.08 | wind | 9 | 43200 | < th | dose dependent | sin | 7 | NA |
| 650 | 49.11 | wind | 3 | 43200 | < th | dose independent | sin | 7 | NA |
| 684 | 49.16 | humidity | 70 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 705 | 49.17 | humidity | 60 | 14400 | > th | dose dependent | sin | 20 | NA |
| 711 | 49.18 | humidity | 70 | 14400 | > th | dose independent | sin | 13 | NA |
| 737 | 49.20 | humidity | 70 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 804 | 49.25 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 937 | 49.39 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 21 |