Os08g0152900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os08g0152900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.27 | 0.584 | 4.96 | 0.634 | 0.605 | 0.107 | -1.6 | 1.65 | 0.266 | 11 | 1015 | 4677 | -- | -- |
| 163.34 | 0.595 | 4.99 | 0.277 | 0.641 | 0.349 | -1.56 | -- | 0.218 | 11.1 | 1014 | 9544 | -- | -- |
| 165 | 0.598 | 4.96 | 0.572 | 0.618 | 0.0996 | -- | 1.59 | 0.259 | 10.7 | 1015 | 4773 | -- | -- |
| 172.13 | 0.611 | 5 | 0.129 | 0.615 | 0.33 | -- | -- | 0.133 | 10.7 | 1014 | 9488 | -- | -- |
| 188.44 | 0.639 | 4.98 | 0.555 | -- | 0.107 | -- | 1.61 | 0.257 | -- | 1015 | 4761 | -- | -- |
| 167.54 | 0.607 | 4.97 | 0.303 | 0.608 | -- | -1.55 | -- | 0.222 | 11 | -- | -- | -- | -- |
| 177.58 | 0.624 | 4.97 | 0.239 | 0.62 | -- | -- | -- | 0.216 | 10.7 | -- | -- | -- | -- |
| 196.06 | 0.652 | 5.01 | 0.114 | -- | 0.324 | -- | -- | 0.127 | -- | 1014 | 10427 | -- | -- |
| 172.46 | 0.612 | 5 | -- | 0.626 | 0.359 | -- | -- | 0.11 | 10.8 | 1014 | 9353 | -- | -- |
| 201.34 | 0.663 | 4.99 | 0.226 | -- | -- | -- | -- | 0.212 | -- | -- | -- | -- | -- |
| 179.08 | 0.626 | 4.98 | -- | 0.618 | -- | -- | -- | 0.189 | 10.7 | -- | -- | -- | -- |
| 196.32 | 0.653 | 5.01 | -- | -- | 0.369 | -- | -- | 0.116 | -- | 1014 | 8709 | -- | -- |
| 202.69 | 0.665 | 5 | -- | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.99 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 3 | 141.71 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 4 | 141.71 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 5 | 141.88 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 12 | 142.11 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 20 | 142.34 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 51 | 143.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 179 | 145.17 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 180 | 145.18 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 184 | 145.23 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 203 | 145.49 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 215 | 145.63 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 227 | 145.74 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 234 | 145.80 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 256 | 146.02 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 269 | 146.15 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 301 | 146.36 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 306 | 146.43 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 314 | 146.53 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 336 | 146.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 337 | 146.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 346 | 146.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 347 | 146.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 357 | 146.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 358 | 146.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 359 | 146.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 384 | 147.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 392 | 147.08 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 394 | 147.09 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 400 | 147.13 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 407 | 147.14 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 411 | 147.15 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 442 | 147.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 445 | 147.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 449 | 147.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 535 | 147.77 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 550 | 147.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 557 | 147.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 14 |
| 639 | 148.13 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 663 | 148.23 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 693 | 148.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 695 | 148.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 725 | 148.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 748 | 148.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 777 | 148.54 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 788 | 148.59 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 789 | 148.59 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 790 | 148.59 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 799 | 148.61 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 832 | 148.72 | wind | 3.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 833 | 148.72 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 845 | 148.79 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 857 | 148.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 859 | 148.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 16 |
| 865 | 148.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 16 |
| 876 | 148.87 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 926 | 149.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 949 | 149.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 996 | 149.20 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 998 | 149.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 19 |