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Os08g0151500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0196) R2 : 0.601
β1 : 0.86 (0.0718) R2dD : 0.13 R2D : 0.123
β2 : 1.07 (0.0465) R2dC : 0.464 R2C : 0.47
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.155 (0.0419) R2dN8 : 0.016 R2N8 : -0.00173
σ : 0.369
deviance : 62.02
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_____
C
peak time of C : 0.316
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.68 0.324 10 1.01 1.08 0.546 -0.714 -0.352 0.248 0.393 70.25 1411 -- --
47.97 0.323 10 0.968 1.08 0.536 -0.737 -- 0.231 0.409 70.8 1410 -- --
49.86 0.329 10 1.03 1.08 0.559 -- -0.34 0.249 0.37 70.81 1410 -- --
50.12 0.33 10 0.983 1.09 0.542 -- -- 0.236 0.394 71 1410 -- --
87.37 0.438 10 0.942 -- 0.696 -- -0.598 0.119 -- 71 1598 -- --
59.05 0.36 10 0.828 1.07 -- -0.83 -- 0.151 0.336 -- -- -- --
62.02 0.369 10 0.86 1.07 -- -- -- 0.155 0.316 -- -- -- --
89.27 0.442 10 0.931 -- 0.691 -- -- 0.118 -- 71 1598 -- --
74.93 0.403 10 -- 1.08 0.463 -- -- 0.169 0.417 72 1416 -- --
133.92 0.541 10 0.896 -- -- -- -- 0.172 -- -- -- -- --
81.53 0.422 10.1 -- 1.08 -- -- -- 0.0591 0.358 -- -- -- --
112.14 0.495 10 -- -- 0.678 -- -- 0.0161 -- 71 1598 -- --
155.1 0.581 10 -- -- -- -- -- 0.0723 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 46.29 humidity 70 1440 < th dose independent rect. 16 2
2 46.48 humidity 70 1440 > th dose independent rect. 16 2
6 46.85 radiation 40 1440 > th dose independent rect. 14 1
24 47.03 humidity 70 1440 > th dose independent rect. 16 22
25 47.18 radiation 40 1440 > th dose dependent rect. 12 1
27 47.22 radiation 10 1440 > th dose independent rect. 16 22
28 47.23 radiation 40 1440 > th dose independent rect. 12 3
46 47.27 radiation 10 1440 > th dose dependent rect. 12 1
48 47.29 humidity 70 1440 < th dose independent rect. 16 22
49 47.30 humidity 70 1440 > th dose independent sin 16 NA
51 47.31 humidity 70 1440 > th dose independent rect. 16 16
52 47.32 radiation 40 1440 > th dose dependent rect. 12 3
55 47.33 radiation 40 1440 > th dose dependent rect. 12 21
81 47.40 radiation 1 1440 > th dose dependent rect. 12 6
98 47.43 humidity 70 1440 < th dose independent rect. 12 21
110 47.45 humidity 70 1440 < th dose independent rect. 11 8
120 47.48 humidity 70 1440 < th dose independent sin 18 NA
121 47.48 humidity 70 1440 > th dose independent rect. 16 7
123 47.48 humidity 70 1440 > th dose independent rect. 12 21
125 47.49 humidity 70 1440 > th dose independent rect. 16 13
208 47.58 radiation 10 1440 > th dose independent rect. 8 23
213 47.60 humidity 70 1440 > th dose independent rect. 12 7
214 47.60 humidity 70 1440 > th dose independent rect. 12 10
220 47.60 humidity 70 1440 > th dose independent rect. 11 18
239 47.61 radiation 10 1440 > th dose dependent rect. 12 21
247 47.62 radiation 10 1440 > th dose independent rect. 11 23
272 47.67 radiation 1 1440 > th dose dependent sin 18 NA
277 47.69 radiation 40 1440 < th dose dependent rect. 11 7
278 47.70 radiation 40 1440 < th dose dependent sin 19 NA
280 47.70 radiation 40 1440 < th dose dependent rect. 11 12
305 47.72 radiation 40 1440 < th dose dependent rect. 11 17
310 47.73 radiation 40 1440 < th dose dependent rect. 8 10
311 47.73 radiation 40 1440 < th dose dependent rect. 8 14
319 47.74 radiation 40 1440 < th dose dependent rect. 8 12
323 47.75 radiation 40 1440 < th dose independent rect. 12 3
383 47.79 humidity 70 1440 > th dose independent rect. 7 12
384 47.79 humidity 70 1440 > th dose independent rect. 1 18
395 47.80 humidity 70 1440 > th dose independent rect. 7 16
399 47.80 humidity 70 1440 > th dose independent rect. 3 19
404 47.80 humidity 70 1440 > th dose independent rect. 23 20
419 47.81 humidity 70 1440 > th dose independent no NA NA
474 47.81 humidity 70 1440 > th dose independent rect. 23 23
477 47.81 humidity 70 1440 < th dose dependent rect. 12 1
510 47.82 humidity 50 1440 > th dose dependent rect. 12 1
515 47.82 radiation 40 1440 < th dose dependent rect. 11 22
517 47.83 radiation 10 1440 > th dose independent rect. 6 12
556 47.84 humidity 70 1440 < th dose independent no NA NA
625 47.85 radiation 10 1440 > th dose independent no NA NA
722 47.87 radiation 1 1440 > th dose dependent rect. 8 10
772 47.90 radiation 40 1440 > th dose independent sin 14 NA
787 47.91 radiation 40 1440 < th dose independent rect. 12 12
830 47.94 radiation 40 1440 < th dose independent rect. 12 19
842 47.95 radiation 40 1440 < th dose independent rect. 12 16
864 47.97 humidity 70 1440 < th dose independent rect. 16 17
908 47.99 radiation 40 1440 > th dose independent rect. 12 1
909 47.99 wind 9 43200 > th dose independent rect. 20 10
921 48.00 radiation 10 1440 > th dose independent rect. 8 10
956 48.02 wind 9 43200 < th dose independent rect. 20 10