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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0151300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Myb, DNA-binding domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.2 (0.066) R2 : 0.476
β1 : -4.42 (0.242) R2dD : 0.398 R2D : 0.327
β2 : -- (--) R2dC : -- R2C : --
β3 : 11.2 (1.23) R2dE : 0.0954 R2E : 0.0756
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.806 (0.141) R2dN8 : 0.0503 R2N8 : -0.00492
σ : 1.23
deviance : 702.96
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_____
C
peak time of C : --
E
wheather : humidity
threshold : 81.34
memory length : 11
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.39
open length of G : 2.69

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
690.71 1.22 4.23 -4.55 0.116 28.5 1.98 -75 -0.797 3.82 80 10 5 1
691.4 1.22 4.22 -4.32 0.108 11.1 1.91 -- -0.804 4.13 81.39 10 4.13 3.62
698.94 1.23 4.23 -4.59 0.274 28.5 -- -74.4 -0.811 7.6 79.89 11 4.83 1.36
698.96 1.23 4.2 -4.42 0.267 11 -- -- -0.812 7.59 81.28 11 4.34 2.76
702.96 1.23 4.24 -4.58 -- 28.4 -- -73.5 -0.805 -- 79.99 11 4.82 1.21
813.38 1.34 4.2 -4.35 0.267 -- 2.22 -- -0.831 4.51 -- -- -- --
823.1 1.34 4.2 -4.37 0.384 -- -- -- -0.843 7.1 -- -- -- --
702.96 1.23 4.2 -4.42 -- 11.2 -- -- -0.806 -- 81.34 11 4.39 2.69
1208.92 1.63 4.09 -- 0.242 10.1 -- -- -0.314 8.97 81.88 6 4.7 3.2
830.88 1.35 4.21 -4.36 -- -- -- -- -0.836 -- -- -- -- --
1325.78 1.7 4.09 -- 0.346 -- -- -- -0.356 7.91 -- -- -- --
1212.26 1.63 4.09 -- -- 10.2 -- -- -0.312 -- 81.88 6 4.7 3.2
1332.28 1.7 4.1 -- -- -- -- -- -0.352 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 688.71 wind 1.0 14400 > th dose independent rect. 24 3
2 689.90 wind 1.0 14400 < th dose independent rect. 24 3
3 690.71 humidity 80.0 10 < th dose independent rect. 5 1
8 690.71 humidity 80.0 10 < th dose dependent rect. 5 1
30 698.64 atmosphere 995.0 43200 > th dose independent rect. 20 15
32 698.73 atmosphere 995.0 43200 < th dose independent sin 8 NA
35 699.05 atmosphere 995.0 43200 > th dose independent sin 8 NA
36 699.37 atmosphere 995.0 43200 < th dose independent rect. 21 14
41 700.93 atmosphere 995.0 43200 < th dose independent rect. 22 12
48 701.65 atmosphere 995.0 43200 < th dose dependent sin 11 NA
59 702.43 atmosphere 995.0 43200 < th dose dependent rect. 17 16
63 702.63 atmosphere 995.0 43200 > th dose independent rect. 4 4
64 702.63 atmosphere 995.0 43200 < th dose dependent rect. 21 12
71 703.24 atmosphere 995.0 43200 < th dose dependent rect. 3 5
72 703.33 atmosphere 995.0 43200 < th dose independent rect. 1 8
73 703.46 atmosphere 995.0 43200 > th dose independent rect. 2 7
75 703.50 atmosphere 995.0 43200 < th dose independent rect. 4 4
105 708.31 wind 3.0 14400 < th dose independent rect. 22 1
109 709.28 wind 3.0 14400 > th dose independent rect. 22 1
115 709.67 wind 1.0 14400 > th dose independent rect. 1 1
117 709.90 radiation 40.0 14400 > th dose independent rect. 7 1
133 709.90 radiation 40.0 14400 > th dose dependent rect. 7 1
149 709.93 wind 5.0 14400 < th dose dependent rect. 22 1
151 710.14 wind 3.0 14400 > th dose independent rect. 8 1
162 711.26 wind 3.0 10 > th dose dependent rect. 6 1
164 711.86 humidity 90.0 14400 > th dose dependent rect. 12 2
179 713.78 wind 3.0 14400 < th dose independent rect. 8 1
183 714.27 wind 5.0 14400 < th dose dependent rect. 8 1
185 714.81 atmosphere 995.0 43200 < th dose dependent rect. 12 18
221 715.09 wind 9.0 14400 > th dose independent rect. 23 2
234 716.61 wind 9.0 14400 > th dose dependent rect. 23 2
250 718.23 wind 1.0 14400 < th dose independent rect. 1 1
260 719.15 wind 1.0 14400 > th dose dependent rect. 8 1
266 719.37 wind 1.0 14400 > th dose dependent rect. 22 1
267 719.55 wind 1.0 14400 < th dose dependent rect. 16 16
278 719.92 precipitation 0.1 14400 > th dose independent rect. 12 1
279 719.92 precipitation 0.1 14400 > th dose dependent rect. 12 1
286 720.41 wind 1.0 14400 < th dose dependent rect. 22 10
287 720.45 wind 1.0 14400 < th dose dependent rect. 13 19
292 720.91 wind 3.0 14400 < th dose dependent rect. 22 4
296 721.04 wind 1.0 14400 < th dose dependent rect. 1 3
308 721.79 wind 1.0 14400 < th dose independent rect. 17 15
309 721.81 wind 1.0 14400 > th dose independent rect. 22 11
318 722.22 temperature 20.0 4320 > th dose independent rect. 19 1
319 722.25 wind 9.0 14400 < th dose independent rect. 23 1
322 722.40 temperature 20.0 4320 < th dose independent rect. 19 1
323 722.40 humidity 90.0 14400 > th dose independent rect. 12 1
333 722.86 wind 1.0 14400 < th dose independent rect. 19 13
334 722.93 temperature 20.0 4320 > th dose independent rect. 16 7
342 723.24 temperature 20.0 4320 > th dose independent rect. 16 5
346 723.34 wind 1.0 14400 < th dose independent rect. 21 11
347 723.35 temperature 20.0 4320 < th dose independent rect. 16 7
350 723.41 temperature 20.0 14400 > th dose independent rect. 16 1
362 723.61 wind 3.0 10 > th dose independent rect. 5 2
371 723.77 precipitation 0.1 14400 < th dose independent rect. 13 1
372 723.77 precipitation 0.1 14400 < th dose dependent rect. 13 1
373 723.80 wind 1.0 14400 < th dose independent sin 11 NA
379 723.88 humidity 90.0 720 < th dose dependent rect. 5 1
398 724.16 atmosphere 995.0 43200 < th dose dependent sin 15 NA
400 724.19 wind 1.0 14400 > th dose independent rect. 17 15
417 724.51 wind 3.0 14400 < th dose dependent rect. 1 8
419 724.55 temperature 20.0 4320 < th dose independent rect. 16 5
422 724.68 temperature 20.0 4320 < th dose independent rect. 16 1
428 724.73 wind 1.0 14400 < th dose independent rect. 14 18
452 725.17 temperature 20.0 4320 > th dose independent sin 18 NA
469 725.52 wind 9.0 14400 < th dose independent rect. 22 3
494 725.80 temperature 20.0 4320 < th dose independent sin 18 NA
501 725.86 temperature 20.0 4320 > th dose independent rect. 11 14
526 726.14 temperature 20.0 4320 < th dose independent rect. 11 13
533 726.24 wind 1.0 14400 > th dose independent sin 11 NA
539 726.27 wind 3.0 14400 < th dose dependent rect. 1 1
559 726.51 wind 3.0 14400 < th dose dependent sin 9 NA
604 726.91 wind 1.0 14400 > th dose independent rect. 14 18
624 727.08 temperature 20.0 720 < th dose independent rect. 22 9
638 727.26 humidity 90.0 14400 < th dose independent rect. 12 1
659 727.47 humidity 90.0 14400 > th dose independent rect. 15 1
814 728.80 temperature 20.0 720 > th dose independent rect. 23 8
929 729.68 temperature 20.0 14400 < th dose dependent rect. 17 3
952 729.85 wind 3.0 14400 < th dose independent sin 7 NA
967 730.01 temperature 20.0 720 > th dose independent rect. 1 6