Os08g0150500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os08g0150500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 177.48 | 0.626 | 3.76 | 1.17 | 1.06 | 0.784 | 0.986 | 2.2 | 0.509 | 0.51 | 65 | 1396 | -- | -- |
| 183.7 | 0.631 | 3.76 | 1.4 | 1.05 | 0.905 | 0.932 | -- | 0.557 | 0.484 | 64.43 | 1414 | -- | -- |
| 181.17 | 0.627 | 3.77 | 1.15 | 1.03 | 0.783 | -- | 2.18 | 0.514 | 0.403 | 66 | 1476 | -- | -- |
| 187.49 | 0.638 | 3.76 | 1.37 | 1.02 | 0.9 | -- | -- | 0.56 | 0.536 | 65.39 | 1423 | -- | -- |
| 217.04 | 0.69 | 3.74 | 1.34 | -- | 0.836 | -- | 0.744 | 0.545 | -- | 69.72 | 1636 | -- | -- |
| 198.61 | 0.661 | 3.78 | 1.4 | 1.01 | -- | 0.85 | -- | 0.473 | 0.37 | -- | -- | -- | -- |
| 201.71 | 0.665 | 3.78 | 1.37 | 1.01 | -- | -- | -- | 0.468 | 0.437 | -- | -- | -- | -- |
| 219.16 | 0.693 | 3.74 | 1.37 | -- | 0.861 | -- | -- | 0.553 | -- | 69.72 | 1636 | -- | -- |
| 225.69 | 0.7 | 3.75 | -- | 1.2 | 1.36 | -- | -- | 0.629 | 24 | 82.24 | 2322 | -- | -- |
| 265.4 | 0.761 | 3.76 | 1.4 | -- | -- | -- | -- | 0.485 | -- | -- | -- | -- | -- |
| 250.96 | 0.741 | 3.81 | -- | 1.03 | -- | -- | -- | 0.316 | 0.505 | -- | -- | -- | -- |
| 265.96 | 0.762 | 3.77 | -- | -- | 0.902 | -- | -- | 0.432 | -- | 75.41 | 3071 | -- | -- |
| 317.21 | 0.831 | 3.79 | -- | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 169.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 169.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 169.26 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 5 | 169.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 6 | 169.50 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 12 |
| 11 | 170.48 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 12 |
| 12 | 170.48 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 12 |
| 16 | 170.62 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 20 | 170.63 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 7 |
| 24 | 170.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 25 | 170.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 29 | 171.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 31 | 171.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 36 | 171.30 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 42 | 171.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 43 | 171.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 44 | 171.49 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 46 | 171.55 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 47 | 171.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 48 | 171.55 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 49 | 171.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 53 | 171.65 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 54 | 171.65 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 7 |
| 56 | 171.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 57 | 171.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 68 | 171.78 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 9 |
| 70 | 171.78 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 9 |
| 73 | 171.85 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 74 | 171.85 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 117 | 172.20 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 9 |
| 144 | 172.36 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 147 | 172.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 148 | 172.41 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 170 | 172.72 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 173 | 172.72 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 184 | 172.84 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 190 | 172.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 191 | 172.97 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 211 | 173.28 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 212 | 173.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 214 | 173.31 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 216 | 173.37 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 228 | 173.50 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 1 | 14 |
| 231 | 173.55 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 235 | 173.59 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 240 | 173.63 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 248 | 173.70 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 251 | 173.73 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 276 | 173.88 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 18 |
| 296 | 173.99 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 309 | 174.11 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 325 | 174.17 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 326 | 174.17 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 336 | 174.22 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 349 | 174.29 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 351 | 174.29 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 365 | 174.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 368 | 174.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 371 | 174.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 377 | 174.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 383 | 174.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 385 | 174.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 396 | 174.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 15 |
| 401 | 174.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 15 |
| 409 | 174.49 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 412 | 174.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 15 |
| 427 | 174.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 428 | 174.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 432 | 174.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 435 | 174.56 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 19 |
| 436 | 174.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 19 |
| 441 | 174.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 465 | 174.66 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 471 | 174.68 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 491 | 174.69 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 509 | 174.75 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 598 | 174.97 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 612 | 175.00 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 615 | 175.01 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 625 | 175.02 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 634 | 175.04 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 20 | NA |
| 711 | 175.14 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 20 | 21 |
| 750 | 175.18 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 752 | 175.19 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 778 | 175.22 | humidity | 60.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 782 | 175.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 839 | 175.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 859 | 175.32 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 861 | 175.32 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 868 | 175.33 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 869 | 175.33 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 872 | 175.33 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 910 | 175.35 | humidity | 70.0 | 14400 | < th | dose dependent | no | NA | NA |