Os08g0148500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0148500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.46 | 0.365 | 2.97 | 0.00846 | 0.0982 | 1.48 | 0.183 | -6.83 | -0.0265 | 10.4 | 20.62 | 120 | 6.17 | 1.16 |
| 64.58 | 0.374 | 2.99 | 0.0989 | 0.0953 | 3.78 | -0.245 | -- | -0.0162 | 9.71 | 19.1 | 104 | 6.42 | 1.87 |
| 60.59 | 0.363 | 2.97 | 0.014 | 0.0992 | 1.48 | -- | -6.79 | -0.0252 | 10.3 | 20.49 | 126 | 6.1 | 1.15 |
| 63.3 | 0.371 | 2.98 | 0.0243 | 0.108 | 4.54 | -- | -- | -0.0342 | 9.96 | 19.09 | 107 | 6.43 | 1.75 |
| 61.17 | 0.364 | 2.97 | 0.0142 | -- | 1.53 | -- | -6.73 | -0.026 | -- | 20.64 | 122 | 6.15 | 1.28 |
| 83.4 | 0.428 | 2.98 | -0.0523 | 0.14 | -- | -0.283 | -- | -0.0578 | 8.28 | -- | -- | -- | -- |
| 83.57 | 0.428 | 2.98 | -0.0591 | 0.142 | -- | -- | -- | -0.0567 | 9.3 | -- | -- | -- | -- |
| 63.99 | 0.373 | 2.98 | 0.0238 | -- | 4.58 | -- | -- | -0.034 | -- | 19.06 | 107 | 6.43 | 1.75 |
| 63.31 | 0.371 | 2.98 | -- | 0.108 | 4.53 | -- | -- | -0.0369 | 9.94 | 19.08 | 107 | 6.43 | 1.75 |
| 84.75 | 0.43 | 2.98 | -0.0598 | -- | -- | -- | -- | -0.0561 | -- | -- | -- | -- | -- |
| 83.66 | 0.428 | 2.98 | -- | 0.142 | -- | -- | -- | -0.0501 | 9.33 | -- | -- | -- | -- |
| 64 | 0.373 | 2.98 | -- | -- | 4.57 | -- | -- | -0.0366 | -- | 19.04 | 109 | 6.41 | 1.75 |
| 84.84 | 0.43 | 2.98 | -- | -- | -- | -- | -- | -0.0495 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.26 | temperature | 20.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 3 | 62.86 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 13 | 65.35 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 23 | 65.97 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 48 | 69.85 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 62 | 70.39 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 64 | 70.74 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 104 | 72.69 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 161 | 74.02 | humidity | 90.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 176 | 74.29 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 237 | 74.75 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 4 |
| 301 | 75.39 | wind | 5.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 337 | 75.73 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 348 | 75.87 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 349 | 75.87 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 358 | 76.05 | temperature | 30.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 360 | 76.06 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 365 | 76.09 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 367 | 76.10 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 1 |
| 368 | 76.10 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 370 | 76.11 | wind | 9.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 373 | 76.11 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 375 | 76.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 381 | 76.11 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 383 | 76.11 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 387 | 76.11 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 390 | 76.11 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 391 | 76.11 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 393 | 76.11 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 394 | 76.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 412 | 76.14 | radiation | 1.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 415 | 76.17 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 23 |
| 416 | 76.17 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 23 |
| 444 | 76.33 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 445 | 76.34 | wind | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 468 | 76.43 | wind | 9.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 473 | 76.48 | radiation | 40.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 474 | 76.49 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 537 | 76.88 | humidity | 50.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 563 | 77.02 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 578 | 77.12 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 596 | 77.28 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 612 | 77.45 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 655 | 77.71 | radiation | 20.0 | 90 | < th | dose independent | rect. | 7 | 1 |
| 656 | 77.72 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 658 | 77.72 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 758 | 78.16 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 868 | 78.55 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 919 | 78.66 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 2 |
| 922 | 78.68 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 931 | 78.69 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 1 |