Os08g0145300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os08g0145300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.32 | 0.34 | 10.2 | 1.09 | 0.108 | -0.74 | 1.01 | 0.828 | 0.444 | 8.36 | 20.2 | 19332 | -- | -- |
| 52.28 | 0.337 | 10.2 | 1.04 | 0.162 | -0.995 | 1.1 | -- | 0.416 | 8.36 | 19.17 | 18577 | -- | -- |
| 55.32 | 0.346 | 10.2 | 1.12 | 0.12 | -0.735 | -- | 0.855 | 0.453 | 7.2 | 20.16 | 18749 | -- | -- |
| 55.08 | 0.346 | 10.2 | 1.09 | 0.129 | -0.986 | -- | -- | 0.413 | 7.65 | 19.2 | 18690 | -- | -- |
| 56.04 | 0.349 | 10.2 | 1.13 | -- | -0.737 | -- | 0.856 | 0.448 | -- | 20 | 18648 | -- | -- |
| 65.91 | 0.381 | 10.3 | 0.175 | 0.118 | -- | 1.01 | -- | 0.0842 | 8.55 | -- | -- | -- | -- |
| 69.13 | 0.389 | 10.3 | 0.205 | 0.122 | -- | -- | -- | 0.0834 | 7.63 | -- | -- | -- | -- |
| 55.76 | 0.348 | 10.2 | 1.12 | -- | -1.02 | -- | -- | 0.405 | -- | 19.21 | 18690 | -- | -- |
| 65.1 | 0.376 | 10.3 | -- | 0.125 | -0.345 | -- | -- | 0.181 | 7.28 | 22.9 | 4143 | -- | -- |
| 69.93 | 0.391 | 10.3 | 0.207 | -- | -- | -- | -- | 0.0852 | -- | -- | -- | -- | -- |
| 70.24 | 0.392 | 10.3 | -- | 0.124 | -- | -- | -- | 0.0605 | 7.52 | -- | -- | -- | -- |
| 65.8 | 0.378 | 10.3 | -- | -- | -0.347 | -- | -- | 0.18 | -- | 22.9 | 3582 | -- | -- |
| 71.06 | 0.393 | 10.3 | -- | -- | -- | -- | -- | 0.0622 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 51.70 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 3 | 51.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 5 | 51.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 6 | 51.97 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 7 | 51.98 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 9 | 52.04 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 10 | 52.04 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 11 | 52.06 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 12 | 52.08 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 13 | 52.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 14 | 52.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 15 | 52.10 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 16 | 52.10 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 18 | 52.11 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 20 | 52.13 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 23 | 52.14 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 26 | 52.15 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 29 | 52.16 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 31 | 52.16 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 32 | 52.17 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 33 | 52.18 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 34 | 52.18 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 35 | 52.18 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 38 | 52.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 41 | 52.21 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 46 | 52.24 | wind | 9.0 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 48 | 52.25 | wind | 9.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 61 | 52.27 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 71 | 52.29 | wind | 9.0 | 43200 | < th | dose independent | rect. | 6 | 9 |
| 74 | 52.30 | wind | 9.0 | 43200 | < th | dose independent | rect. | 1 | 14 |
| 77 | 52.31 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 92 | 52.34 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 104 | 52.34 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 115 | 52.37 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 116 | 52.38 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 121 | 52.38 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 122 | 52.38 | wind | 9.0 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 129 | 52.40 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 138 | 52.40 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 140 | 52.41 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 148 | 52.42 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 152 | 52.43 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 157 | 52.44 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 179 | 52.47 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 184 | 52.49 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 186 | 52.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 188 | 52.50 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 207 | 52.53 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 220 | 52.54 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 234 | 52.57 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 236 | 52.58 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 259 | 52.60 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 262 | 52.61 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 280 | 52.64 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 291 | 52.65 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 310 | 52.69 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 317 | 52.70 | wind | 9.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 318 | 52.70 | wind | 9.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 350 | 52.74 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 402 | 52.79 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 436 | 52.83 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 478 | 52.91 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 518 | 52.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 521 | 52.97 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 583 | 53.05 | wind | 7.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 586 | 53.06 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 666 | 53.16 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 685 | 53.18 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 694 | 53.20 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 752 | 53.27 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 763 | 53.28 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 775 | 53.29 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 794 | 53.31 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 806 | 53.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 815 | 53.32 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 845 | 53.34 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 946 | 53.40 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 953 | 53.41 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 958 | 53.41 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 992 | 53.44 | temperature | 20.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 993 | 53.44 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 11 | 1 |