Os08g0143900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0143900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.03 | 0.525 | 10.7 | -1.91 | 4.33 | 1.07 | 1.03 | -0.324 | 0.0427 | 4.92 | 27.5 | 376 | -- | -- |
| 125.13 | 0.521 | 10.7 | -1.92 | 4.33 | 1.08 | 0.921 | -- | 0.0388 | 4.93 | 27.18 | 374 | -- | -- |
| 126.87 | 0.525 | 10.7 | -1.91 | 4.31 | 1.08 | -- | 0.355 | 0.0423 | 4.91 | 26.11 | 376 | -- | -- |
| 127.09 | 0.525 | 10.7 | -1.9 | 4.31 | 1.09 | -- | -- | 0.0418 | 4.92 | 26.11 | 376 | -- | -- |
| 167.93 | 0.604 | 10.7 | -1.78 | -- | 5.15 | -- | 1.35 | 0.306 | -- | 2.033 | 590 | -- | -- |
| 142.53 | 0.56 | 10.7 | -1.98 | 4.85 | -- | 0.979 | -- | -0.0513 | 4.81 | -- | -- | -- | -- |
| 145.02 | 0.564 | 10.7 | -1.98 | 4.85 | -- | -- | -- | -0.0563 | 4.8 | -- | -- | -- | -- |
| 168.39 | 0.604 | 10.7 | -1.76 | -- | 5.17 | -- | -- | 0.252 | -- | 2.044 | 595 | -- | -- |
| 217.02 | 0.686 | 10.6 | -- | 4.12 | 1.22 | -- | -- | 0.334 | 4.93 | 20.09 | 446 | -- | -- |
| 1390.9 | 1.74 | 10.7 | -1.8 | -- | -- | -- | -- | 0.0697 | -- | -- | -- | -- | -- |
| 248.54 | 0.737 | 10.6 | -- | 4.82 | -- | -- | -- | 0.164 | 4.81 | -- | -- | -- | -- |
| 248.4 | 0.734 | 10.6 | -- | -- | 5.21 | -- | -- | 0.43 | -- | 1.86 | 602 | -- | -- |
| 1476.39 | 1.79 | 10.7 | -- | -- | -- | -- | -- | 0.269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 8 | 14 |
| 5 | 118.26 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 8 | 14 |
| 17 | 119.96 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 21 |
| 18 | 120.22 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 19 |
| 23 | 120.61 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 24 | 120.81 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 26 | 120.90 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 21 |
| 31 | 121.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 20 |
| 47 | 121.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 13 |
| 48 | 121.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 53 | 122.11 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 8 | 13 |
| 64 | 122.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 65 | 122.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 66 | 122.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 68 | 122.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 69 | 122.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 13 |
| 70 | 122.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 79 | 122.85 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 82 | 122.94 | radiation | 20.0 | 270 | > th | dose independent | rect. | 12 | 21 |
| 88 | 123.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 89 | 123.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 11 |
| 90 | 123.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 95 | 123.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 101 | 123.37 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 103 | 123.39 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 116 | 123.46 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 117 | 123.47 | humidity | 80.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 123 | 123.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 11 |
| 124 | 123.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 131 | 123.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 13 |
| 146 | 123.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 151 | 123.90 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 158 | 124.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 159 | 124.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 160 | 124.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 161 | 124.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 13 |
| 170 | 124.11 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 4 |
| 188 | 124.30 | radiation | 40.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 194 | 124.35 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 199 | 124.40 | radiation | 20.0 | 270 | < th | dose independent | rect. | 7 | 22 |
| 206 | 124.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 220 | 124.65 | humidity | 70.0 | 270 | > th | dose independent | rect. | 8 | 13 |
| 242 | 124.83 | radiation | 20.0 | 720 | < th | dose independent | rect. | 24 | 10 |
| 244 | 124.85 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 4 |
| 245 | 124.85 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 247 | 124.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 20 |
| 249 | 124.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 20 |
| 266 | 124.92 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 4 |
| 277 | 124.94 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 302 | 125.02 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 20 |
| 305 | 125.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 346 | 125.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 347 | 125.34 | radiation | 40.0 | 270 | < th | dose independent | sin | 13 | NA |
| 353 | 125.38 | radiation | 10.0 | 720 | < th | dose independent | rect. | 24 | 8 |
| 368 | 125.45 | radiation | 1.0 | 270 | > th | dose dependent | sin | 18 | NA |
| 372 | 125.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 18 |
| 373 | 125.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 376 | 125.49 | radiation | 40.0 | 270 | < th | dose dependent | sin | 19 | NA |
| 381 | 125.51 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 4 |
| 383 | 125.51 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 4 |
| 390 | 125.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 4 |
| 392 | 125.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 4 |
| 397 | 125.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 403 | 125.61 | radiation | 1.0 | 90 | > th | dose dependent | sin | 13 | NA |
| 418 | 125.64 | humidity | 70.0 | 270 | < th | dose independent | rect. | 12 | 4 |
| 436 | 125.72 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 437 | 125.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 439 | 125.73 | radiation | 30.0 | 270 | < th | dose independent | sin | 17 | NA |
| 441 | 125.73 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 20 |
| 452 | 125.76 | radiation | 40.0 | 720 | < th | dose independent | rect. | 1 | 10 |
| 453 | 125.77 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 4 |
| 469 | 125.79 | radiation | 20.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 471 | 125.80 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 5 |
| 484 | 125.89 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 489 | 125.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 20 |
| 559 | 126.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 560 | 126.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 575 | 126.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 6 |
| 576 | 126.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 6 |
| 583 | 126.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 586 | 126.25 | radiation | 40.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 610 | 126.30 | radiation | 10.0 | 270 | > th | dose independent | rect. | 12 | 4 |
| 627 | 126.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 660 | 126.39 | humidity | 60.0 | 270 | > th | dose independent | rect. | 16 | 20 |
| 695 | 126.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 722 | 126.63 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 730 | 126.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 4 |
| 733 | 126.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 13 |
| 737 | 126.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 13 |
| 755 | 126.77 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 763 | 126.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 19 |
| 765 | 126.81 | radiation | 1.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 825 | 126.94 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 13 |
| 828 | 126.94 | radiation | 40.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 843 | 126.96 | temperature | 30.0 | 720 | < th | dose independent | rect. | 10 | 1 |
| 844 | 126.96 | radiation | 10.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 855 | 126.98 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 897 | 127.06 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 20 |
| 902 | 127.08 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 17 | 5 |
| 912 | 127.10 | radiation | 30.0 | 270 | > th | dose independent | sin | 17 | NA |
| 920 | 127.13 | radiation | 40.0 | 270 | > th | dose independent | sin | 13 | NA |
| 921 | 127.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 5 |
| 923 | 127.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 5 |
| 931 | 127.17 | radiation | 30.0 | 270 | > th | dose independent | rect. | 12 | 4 |
| 988 | 127.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 4 |