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Os08g0143500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycosyl transferase, family 14 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.32 (0.0167) R2 : 0.427
β1 : 1.08 (0.0613) R2dD : 0.407 R2D : 0.304
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.306 (0.0357) R2dN8 : 0.123 R2N8 : 0.0204
σ : 0.314
deviance : 45.2
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.51 0.268 7.45 -1.03 0.4 -62.6 -0.194 -129 0.249 22.5 15.04 5078 -- --
34.54 0.276 8.33 1.04 0.406 -0.745 -0.214 -- 0.296 22.5 15.04 5078 -- --
32.67 0.266 7.45 -1.03 0.402 -62.6 -- -129 0.25 22.5 15.04 5077 -- --
33.32 0.269 8.35 0.857 0.396 -0.539 -- -- 0.239 22.4 19.31 6319 -- --
42.52 0.304 7.45 -1.02 -- -62.4 -- -129 0.251 -- 15.04 5102 -- --
35.58 0.28 8.33 1.07 0.395 -- -0.127 -- 0.304 22.4 -- -- -- --
35.65 0.28 8.33 1.08 0.395 -- -- -- 0.304 22.4 -- -- -- --
42.47 0.304 8.34 0.818 -- -0.598 -- -- 0.217 -- 19.96 6573 -- --
38.73 0.29 8.4 -- 0.353 -0.845 -- -- -0.0111 21.9 21.82 47490 -- --
45.2 0.314 8.32 1.08 -- -- -- -- 0.306 -- -- -- -- --
66.17 0.381 8.36 -- 0.402 -- -- -- 0.184 22.6 -- -- -- --
47.6 0.321 8.39 -- -- -0.886 -- -- -0.0226 -- 21.74 47520 -- --
76.11 0.407 8.35 -- -- -- -- -- 0.185 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.10 temperature 20 10 > th dose independent rect. 19 21
2 31.21 temperature 20 10 > th dose independent rect. 23 17
7 31.52 wind 1 43200 < th dose independent rect. 1 1
9 31.55 wind 1 43200 > th dose independent rect. 1 1
11 31.61 wind 1 43200 < th dose independent rect. 1 12
13 31.70 wind 1 43200 > th dose independent rect. 1 12
16 31.73 wind 1 43200 < th dose independent rect. 1 16
20 31.77 wind 1 43200 < th dose independent rect. 3 10
22 31.80 wind 1 43200 < th dose independent rect. 1 19
23 31.80 wind 3 43200 < th dose dependent rect. 23 5
27 31.82 wind 1 43200 > th dose independent rect. 1 16
30 31.83 wind 3 43200 < th dose dependent rect. 24 3
35 31.88 temperature 25 1440 > th dose independent rect. 24 1
37 31.89 wind 9 14400 < th dose independent rect. 24 4
48 31.93 wind 3 14400 < th dose dependent rect. 3 1
56 31.97 wind 1 43200 < th dose independent rect. 3 14
62 31.99 wind 1 43200 < th dose independent sin 3 NA
67 32.00 temperature 20 10 > th dose independent rect. 23 13
76 32.01 temperature 20 10 > th dose independent rect. 23 23
84 32.02 temperature 10 30 > th dose dependent rect. 6 21
86 32.03 wind 1 43200 < th dose dependent rect. 12 1
91 32.04 wind 3 43200 < th dose dependent rect. 7 1
99 32.06 wind 1 43200 < th dose dependent rect. 9 4
103 32.06 wind 3 43200 < th dose dependent rect. 23 11
121 32.09 temperature 20 10 > th dose independent rect. 6 21
130 32.11 wind 1 43200 > th dose independent rect. 9 3
146 32.13 wind 1 43200 < th dose independent rect. 9 3
153 32.13 humidity 90 43200 < th dose dependent rect. 3 1
163 32.14 wind 1 14400 > th dose dependent rect. 24 1
170 32.15 wind 1 43200 > th dose independent sin 3 NA
171 32.15 temperature 25 270 > th dose independent rect. 23 2
172 32.15 radiation 20 14400 < th dose independent rect. 4 2
178 32.16 wind 1 14400 > th dose independent rect. 23 5
183 32.16 wind 3 43200 < th dose dependent sin 8 NA
187 32.16 wind 1 14400 > th dose dependent rect. 24 4
196 32.17 wind 1 43200 < th dose independent rect. 6 5
215 32.18 wind 3 14400 < th dose independent rect. 19 10
221 32.18 atmosphere 995 30 > th dose dependent rect. 3 16
225 32.19 wind 3 14400 > th dose independent rect. 19 10
227 32.19 temperature 20 10 > th dose independent rect. 6 23
233 32.19 temperature 10 10 > th dose dependent rect. 6 23
267 32.22 temperature 15 90 > th dose dependent rect. 23 4
274 32.23 wind 1 43200 > th dose independent rect. 6 4
275 32.23 wind 3 14400 < th dose independent rect. 22 7
288 32.24 wind 3 14400 < th dose independent rect. 3 1
289 32.24 temperature 25 1440 < th dose independent rect. 24 1
296 32.24 wind 1 14400 > th dose dependent rect. 3 1
307 32.25 wind 3 14400 < th dose independent rect. 24 4
310 32.25 wind 3 43200 < th dose independent rect. 18 13
320 32.26 temperature 20 10 > th dose independent sin 6 NA
321 32.26 temperature 25 90 < th dose independent sin 7 NA
323 32.26 wind 3 14400 > th dose independent rect. 22 7
344 32.27 wind 3 43200 < th dose independent sin 11 NA
345 32.27 wind 3 43200 > th dose independent rect. 6 1
346 32.27 wind 3 43200 < th dose independent rect. 6 1
355 32.27 wind 3 43200 < th dose independent rect. 16 16
359 32.27 wind 7 14400 > th dose dependent rect. 9 2
360 32.27 wind 7 14400 > th dose dependent rect. 7 4
367 32.27 wind 3 43200 < th dose dependent rect. 24 17
368 32.28 wind 3 14400 > th dose independent rect. 3 1
379 32.28 temperature 20 270 > th dose independent rect. 21 16
426 32.29 temperature 15 30 > th dose dependent rect. 23 17
436 32.30 wind 3 43200 > th dose independent rect. 18 13
459 32.30 wind 3 43200 < th dose dependent rect. 16 18
461 32.31 humidity 80 43200 > th dose independent rect. 5 1
497 32.32 wind 3 43200 > th dose independent rect. 16 17
525 32.32 temperature 10 30 > th dose dependent rect. 23 23
526 32.33 wind 3 43200 > th dose independent sin 11 NA
555 32.34 humidity 80 43200 < th dose independent rect. 2 1
559 32.34 temperature 20 10 > th dose independent rect. 19 8
566 32.34 temperature 15 270 > th dose dependent rect. 23 1
572 32.34 wind 1 43200 < th dose dependent rect. 5 13
574 32.34 wind 3 14400 > th dose dependent rect. 23 14
612 32.36 wind 9 14400 < th dose independent rect. 23 1
613 32.36 humidity 80 43200 > th dose independent rect. 2 1
616 32.36 wind 7 14400 > th dose independent rect. 6 7
626 32.36 temperature 25 30 < th dose independent rect. 3 16
646 32.37 humidity 80 43200 > th dose independent rect. 2 4
655 32.37 radiation 30 4320 < th dose independent rect. 17 14
659 32.37 temperature 20 10 > th dose independent rect. 19 17
717 32.39 temperature 25 90 > th dose independent rect. 23 10
727 32.39 humidity 70 43200 > th dose dependent rect. 3 1
735 32.39 wind 7 14400 > th dose dependent rect. 5 8
742 32.39 wind 1 43200 < th dose dependent rect. 5 15
775 32.40 temperature 15 90 > th dose dependent rect. 19 21
783 32.41 wind 7 14400 > th dose independent rect. 22 16
793 32.41 humidity 80 43200 < th dose dependent rect. 23 1
819 32.42 wind 7 14400 < th dose independent rect. 6 7
859 32.43 temperature 10 43200 > th dose independent rect. 9 8
861 32.43 wind 7 14400 < th dose independent rect. 22 16
911 32.44 wind 1 43200 < th dose dependent sin 1 NA
934 32.45 temperature 25 270 > th dose independent rect. 23 8
994 32.46 wind 1 43200 < th dose independent rect. 9 23