Os08g0142900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0142900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.36 | 0.419 | 3.15 | 0.126 | 0.0388 | 0.523 | 0.0947 | 2.16 | 0.0422 | 4.69 | 5 | 1 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 83.05 | 0.427 | 3.15 | 0.158 | 0.0432 | -- | 0.221 | -- | 0.0415 | 2.27 | -- | -- | -- | -- |
| 83.22 | 0.427 | 3.15 | 0.151 | 0.047 | -- | -- | -- | 0.0401 | 3.43 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 83.34 | 0.427 | 3.15 | 0.153 | -- | -- | -- | -- | 0.0413 | -- | -- | -- | -- | -- |
| 83.82 | 0.428 | 3.16 | -- | 0.05 | -- | -- | -- | 0.0232 | 3.42 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 83.96 | 0.428 | 3.16 | -- | -- | -- | -- | -- | 0.0243 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.36 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 2 | 75.46 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 4 | 75.46 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 11 | 75.61 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 14 | 75.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 18 | 75.61 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 24 | 75.61 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 25 | 75.61 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 45 | 75.61 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 52 | 75.76 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 54 | 75.76 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 55 | 75.83 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 57 | 75.86 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 58 | 75.88 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 60 | 75.89 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 65 | 75.96 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 68 | 76.00 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 71 | 76.06 | wind | 7.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 74 | 76.07 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 76 | 76.08 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 80 | 76.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 82 | 76.10 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 83 | 76.10 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 87 | 76.10 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 89 | 76.10 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 94 | 76.10 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 95 | 76.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 96 | 76.10 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 101 | 76.10 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 102 | 76.17 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 107 | 76.58 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 108 | 76.64 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 110 | 76.88 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 115 | 77.06 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 116 | 77.10 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 123 | 77.40 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 155 | 77.80 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 160 | 78.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 162 | 78.08 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 163 | 78.10 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 165 | 78.16 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 168 | 78.16 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 172 | 78.16 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 181 | 78.16 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 182 | 78.16 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 202 | 78.16 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 205 | 78.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 227 | 78.55 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 21 | 8 |
| 229 | 78.63 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 230 | 78.67 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 231 | 78.71 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 234 | 78.79 | wind | 3.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 235 | 78.79 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 236 | 78.83 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 237 | 78.84 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 12 | 15 |
| 241 | 78.88 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 13 | 16 |
| 245 | 78.90 | wind | 5.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 246 | 78.91 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 260 | 78.96 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 263 | 78.97 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 265 | 78.97 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 267 | 78.97 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 270 | 78.97 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 271 | 78.97 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 272 | 78.97 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 274 | 78.97 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 279 | 78.97 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 280 | 78.97 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 281 | 78.97 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 284 | 78.97 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 285 | 78.97 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 289 | 78.97 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 294 | 78.97 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 306 | 79.00 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 324 | 79.04 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 342 | 79.05 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 392 | 79.07 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 393 | 79.07 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 396 | 79.08 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 12 |
| 401 | 79.09 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 23 |
| 402 | 79.09 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 16 | 23 |
| 409 | 79.13 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 416 | 79.15 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 10 | 15 |
| 417 | 79.15 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 10 | 23 |
| 454 | 79.22 | humidity | 50.0 | 720 | < th | dose dependent | rect. | 13 | 1 |
| 483 | 79.31 | atmosphere | 1015.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 504 | 79.31 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 23 |
| 527 | 79.33 | atmosphere | 1015.0 | 720 | < th | dose independent | sin | 22 | NA |
| 528 | 79.33 | atmosphere | 1015.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 530 | 79.34 | atmosphere | 1015.0 | 720 | > th | dose independent | sin | 22 | NA |
| 532 | 79.34 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 538 | 79.35 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 21 | 23 |
| 577 | 79.36 | atmosphere | 1015.0 | 10 | > th | dose independent | sin | 7 | NA |
| 673 | 79.36 | atmosphere | 1015.0 | 10 | > th | dose independent | no | NA | NA |
| 677 | 79.36 | atmosphere | 1015.0 | 10 | < th | dose independent | sin | 7 | NA |
| 698 | 79.36 | atmosphere | 1015.0 | 10 | < th | dose independent | sin | 14 | NA |
| 736 | 79.36 | atmosphere | 1015.0 | 10 | < th | dose independent | sin | 1 | NA |
| 757 | 79.36 | atmosphere | 1015.0 | 10 | < th | dose independent | no | NA | NA |
| 767 | 79.36 | atmosphere | 1015.0 | 10 | > th | dose independent | rect. | 23 | 1 |