Os08g0141000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0141000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.26 | 0.597 | 3.11 | 1.72 | 0.0212 | -1.03 | -0.345 | 14.2 | 0.0428 | 2.59 | 31.6 | 4260 | -- | -- |
| 170.69 | 0.608 | 3.36 | -0.429 | 0.0158 | 0.755 | -0.487 | -- | 0.0575 | 2.33 | 32.1 | 4102 | -- | -- |
| 161.56 | 0.592 | 3.11 | 1.73 | 0.05 | -1.03 | -- | 14.2 | 0.0436 | 6.71 | 31.41 | 4254 | -- | -- |
| 170.74 | 0.609 | 3.36 | -0.405 | 0.0742 | 0.749 | -- | -- | 0.0599 | 7.01 | 32.1 | 4102 | -- | -- |
| 161.69 | 0.592 | 3.11 | 1.74 | -- | -1.04 | -- | 14.3 | 0.0445 | -- | 31.42 | 4248 | -- | -- |
| 187.83 | 0.643 | 3.38 | -0.246 | 0.0971 | -- | -0.206 | -- | -0.0584 | 3.81 | -- | -- | -- | -- |
| 187.94 | 0.642 | 3.38 | -0.243 | 0.0993 | -- | -- | -- | -0.0573 | 4.52 | -- | -- | -- | -- |
| 171.02 | 0.609 | 3.36 | -0.413 | -- | 0.754 | -- | -- | 0.0634 | -- | 32.08 | 4102 | -- | -- |
| 175.06 | 0.616 | 3.35 | -- | 0.0666 | 0.677 | -- | -- | 0.095 | 6.88 | 32.1 | 4102 | -- | -- |
| 188.46 | 0.641 | 3.38 | -0.239 | -- | -- | -- | -- | -0.0547 | -- | -- | -- | -- | -- |
| 189.49 | 0.644 | 3.38 | -- | 0.0947 | -- | -- | -- | -0.0303 | 4.58 | -- | -- | -- | -- |
| 175.32 | 0.617 | 3.35 | -- | -- | 0.676 | -- | -- | 0.095 | -- | 32.09 | 4102 | -- | -- |
| 189.97 | 0.643 | 3.38 | -- | -- | -- | -- | -- | -0.0282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.31 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 15 | 157.50 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 16 | 157.56 | temperature | 30 | 4320 | < th | dose independent | rect. | 23 | 11 |
| 21 | 157.68 | temperature | 30 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 23 | 157.70 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 38 | 157.73 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 168 | 160.07 | temperature | 30 | 4320 | > th | dose dependent | sin | 9 | NA |
| 209 | 160.64 | temperature | 30 | 4320 | > th | dose independent | sin | 9 | NA |
| 219 | 161.04 | temperature | 30 | 4320 | < th | dose independent | sin | 9 | NA |
| 274 | 161.93 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 334 | 162.37 | temperature | 30 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 445 | 162.96 | temperature | 30 | 4320 | > th | dose dependent | no | NA | NA |
| 608 | 163.29 | wind | 1 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 611 | 163.30 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 614 | 163.31 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 617 | 163.33 | wind | 1 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 624 | 163.41 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 762 | 164.22 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 862 | 164.62 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 868 | 164.67 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 21 |
| 887 | 164.75 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 24 | 13 |
| 896 | 164.88 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 19 | 16 |
| 899 | 164.89 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 21 | 12 |
| 903 | 164.91 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 21 | 13 |
| 961 | 165.15 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 21 | 15 |