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Os08g0139700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Terpenoid synthase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.7 (0.0525) R2 : 0.835
β1 : -4.22 (0.198) R2dD : 0.184 R2D : 0.0909
β2 : 10.9 (0.37) R2dC : 2.35 R2C : -0.0186
β3 : 7.08 (0.441) R2dE : 0.694 R2E : -1.74
β4 : 8.2 (0.624) R2dD*C : 0.065 R2D*C : 0.0365
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.263 (0.114) R2dN8 : 0.00257 R2N8 : -0.0243
σ : 0.979
deviance : 441.68
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C
peak time of C : 6.62
E
wheather : temperature
threshold : -4.022
memory length : 473
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.57
open length of G : 18.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
442.28 0.988 13.8 -4.43 11.3 7.45 4.09 -5.66 -0.271 6.57 -1.921 457 6.27 17.5
441.68 0.979 13.7 -4.22 10.9 7.08 8.2 -- -0.263 6.62 -4.022 473 5.57 18.7
450.86 0.989 13.7 -4.37 10.8 7.07 -- -8.34 -0.279 6.67 -1.38 482 6.2 17.8
609.4 1.15 13.8 -4.06 10.7 6.72 -- -- -0.288 6.51 -4.833 460 5.65 18.7
1844.27 2 14.2 -5.3 -- 6.17 -- -7.65 -0.686 -- -59.67 1213 8.61 20.3
698.85 1.24 13.8 -3.46 5.42 -- 7.25 -- 0.0557 6.67 -- -- -- --
824.52 1.34 13.8 -3.36 5.47 -- -- -- 0.0287 6.43 -- -- -- --
736.11 1.26 13.8 -2.98 -- 5.68 -- -- 0.43 -- -374.9 517 18.1 16.3
1006.62 1.48 13.7 -- 8.78 4.54 -- -- 0.307 6.39 -4.419 389 5.88 19
2377.11 2.28 13.9 -3.22 -- -- -- -- 0.144 -- -- -- -- --
1121.79 1.57 13.7 -- 5.42 -- -- -- 0.403 6.47 -- -- -- --
1012.71 1.48 13.9 -- -- 5.65 -- -- 0.456 -- -338.4 509 18.1 16.4
2650.37 2.4 13.8 -- -- -- -- -- 0.501 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 449.17 radiation 20.0 14400 < th dose independent rect. 21 9
4 475.75 precipitation 0.1 43200 < th dose independent rect. 17 2
5 475.75 precipitation 0.1 43200 < th dose dependent rect. 17 2
6 476.27 precipitation 0.1 43200 > th dose dependent rect. 14 5
7 476.45 precipitation 0.1 43200 > th dose independent rect. 17 2
8 477.30 precipitation 0.1 43200 < th dose independent rect. 14 4
9 477.30 precipitation 0.1 43200 < th dose dependent rect. 14 4
10 477.47 precipitation 0.1 43200 > th dose dependent rect. 11 8
17 478.60 radiation 10.0 14400 < th dose dependent rect. 19 10
18 478.61 precipitation 0.1 43200 > th dose independent rect. 14 4
23 479.31 temperature 10.0 270 > th dose dependent rect. 8 17
25 480.49 precipitation 0.1 43200 > th dose dependent rect. 14 8
27 481.37 precipitation 0.1 43200 > th dose dependent rect. 11 11
31 482.03 humidity 80.0 43200 < th dose independent rect. 15 3
32 482.17 precipitation 0.1 43200 < th dose independent rect. 12 7
34 482.17 precipitation 0.1 43200 < th dose dependent rect. 12 7
35 482.40 humidity 80.0 43200 > th dose independent rect. 16 2
43 482.99 precipitation 0.1 43200 < th dose independent rect. 14 8
44 482.99 precipitation 0.1 43200 < th dose dependent rect. 14 8
50 483.57 precipitation 0.1 43200 > th dose independent rect. 14 8
68 484.28 radiation 40.0 43200 < th dose dependent rect. 19 10
71 484.38 precipitation 0.1 43200 > th dose independent rect. 17 5
77 484.83 humidity 90.0 43200 < th dose independent rect. 19 1
90 485.68 atmosphere 1010.0 14400 > th dose dependent rect. 20 1
94 485.90 precipitation 0.1 43200 < th dose independent rect. 12 10
95 485.90 precipitation 0.1 43200 < th dose dependent rect. 12 10
98 486.17 temperature 10.0 270 > th dose dependent rect. 19 8
102 486.27 radiation 30.0 43200 < th dose dependent rect. 4 1
112 486.66 radiation 10.0 14400 < th dose independent rect. 11 20
114 486.76 precipitation 0.1 43200 > th dose dependent rect. 20 1
135 487.67 precipitation 0.1 43200 > th dose independent rect. 20 1
142 487.97 atmosphere 1005.0 14400 > th dose dependent rect. 16 1
162 488.87 precipitation 0.1 43200 < th dose independent rect. 20 1
163 488.87 precipitation 0.1 43200 < th dose dependent rect. 20 1
180 489.28 humidity 80.0 43200 > th dose dependent rect. 18 1
210 490.11 atmosphere 1010.0 14400 > th dose independent rect. 19 1
232 490.47 radiation 10.0 14400 < th dose independent rect. 11 7
240 490.64 radiation 10.0 14400 < th dose independent rect. 11 15
245 490.71 radiation 10.0 14400 < th dose independent rect. 11 12
248 490.73 radiation 10.0 14400 < th dose independent rect. 11 10
285 491.40 atmosphere 1010.0 14400 < th dose independent rect. 19 1
292 491.49 atmosphere 1010.0 14400 > th dose dependent sin 18 NA
298 491.54 radiation 40.0 4320 < th dose dependent rect. 18 3
312 491.65 wind 9.0 43200 > th dose dependent rect. 18 2
349 491.99 temperature 10.0 270 > th dose dependent rect. 19 16
362 492.09 precipitation 0.1 43200 > th dose dependent sin 19 NA
432 492.79 atmosphere 1010.0 14400 > th dose independent rect. 10 2
454 493.00 radiation 1.0 43200 < th dose independent rect. 18 3
534 493.59 radiation 10.0 14400 < th dose independent sin 16 NA
589 493.84 atmosphere 1010.0 14400 > th dose independent rect. 15 1
626 494.00 atmosphere 1010.0 14400 > th dose dependent no NA NA
642 494.16 humidity 90.0 43200 > th dose independent rect. 20 1
659 494.22 atmosphere 1010.0 14400 > th dose dependent rect. 18 23
692 494.45 radiation 10.0 14400 < th dose independent rect. 12 3
731 494.72 atmosphere 1010.0 14400 < th dose independent rect. 10 2
755 494.86 atmosphere 1010.0 14400 > th dose independent rect. 14 9
757 494.87 atmosphere 1010.0 14400 > th dose independent rect. 14 7
767 494.97 atmosphere 1010.0 14400 > th dose dependent rect. 11 1
797 495.19 radiation 40.0 4320 < th dose dependent rect. 22 7
799 495.22 radiation 20.0 43200 < th dose independent rect. 18 12
801 495.24 atmosphere 1010.0 14400 > th dose dependent rect. 9 3
813 495.33 atmosphere 1010.0 14400 > th dose dependent rect. 9 1
839 495.53 atmosphere 1010.0 14400 > th dose independent rect. 10 14
883 495.84 humidity 80.0 43200 < th dose independent rect. 12 2
889 495.93 humidity 90.0 43200 < th dose independent rect. 22 1
906 496.03 atmosphere 1010.0 43200 < th dose dependent rect. 11 1
909 496.06 radiation 30.0 43200 < th dose independent rect. 16 7
911 496.09 atmosphere 1010.0 14400 > th dose independent rect. 10 11
921 496.15 radiation 30.0 43200 < th dose independent rect. 16 5
943 496.29 radiation 30.0 43200 < th dose independent rect. 16 14
944 496.29 radiation 1.0 14400 > th dose dependent rect. 18 11
948 496.31 atmosphere 1005.0 43200 < th dose independent rect. 2 1
959 496.40 atmosphere 1010.0 14400 < th dose independent rect. 15 9
966 496.45 atmosphere 1010.0 14400 < th dose independent rect. 22 2
980 496.51 atmosphere 1005.0 43200 > th dose independent rect. 12 3
995 496.62 atmosphere 1010.0 14400 > th dose independent sin 20 NA