Os08g0135500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : X8 domain containing protein.
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Os08g0135500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : X8 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.83 | 0.425 | 3.84 | 0.542 | 0.0564 | 1.21 | 0.399 | 1.78 | -0.242 | 8.88 | 1016 | 4407 | -- | -- |
| 83.5 | 0.426 | 3.82 | 0.533 | 0.0443 | 0.585 | 0.519 | -- | -0.214 | 9.79 | 1015 | 4338 | -- | -- |
| 82.2 | 0.422 | 3.84 | 0.566 | 0.0692 | 1.3 | -- | 1.92 | -0.236 | 7.33 | 1016 | 4426 | -- | -- |
| 83.26 | 0.425 | 3.82 | 0.581 | 0.0859 | 0.571 | -- | -- | -0.225 | 6.81 | 1014 | 4318 | -- | -- |
| 82.44 | 0.423 | 3.85 | 0.552 | -- | 1.36 | -- | 2.09 | -0.242 | -- | 1016 | 4417 | -- | -- |
| 88.84 | 0.442 | 3.84 | 0.52 | 0.0515 | -- | 0.38 | -- | -0.291 | 8.55 | -- | -- | -- | -- |
| 89.27 | 0.442 | 3.84 | 0.531 | 0.0588 | -- | -- | -- | -0.292 | 6.85 | -- | -- | -- | -- |
| 83.56 | 0.426 | 3.82 | 0.589 | -- | 0.549 | -- | -- | -0.226 | -- | 1014 | 4329 | -- | -- |
| 92.06 | 0.447 | 3.84 | -- | 0.0826 | 0.506 | -- | -- | -0.301 | 6.43 | 1014 | 4158 | -- | -- |
| 89.45 | 0.442 | 3.84 | 0.533 | -- | -- | -- | -- | -0.291 | -- | -- | -- | -- | -- |
| 96.71 | 0.46 | 3.85 | -- | 0.0656 | -- | -- | -- | -0.351 | 6.35 | -- | -- | -- | -- |
| 92.43 | 0.448 | 3.84 | -- | -- | 0.497 | -- | -- | -0.301 | -- | 1014 | 4163 | -- | -- |
| 96.93 | 0.46 | 3.85 | -- | -- | -- | -- | -- | -0.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.34 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 2 | 79.38 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 3 | 79.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 14 | 79.95 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 16 | 80.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 9 |
| 35 | 80.37 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 55 | 80.64 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 63 | 80.76 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 64 | 80.79 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 92 | 81.09 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 133 | 81.37 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 146 | 81.44 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 153 | 81.47 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 13 |
| 156 | 81.48 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 10 |
| 167 | 81.53 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 183 | 81.58 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 1 |
| 197 | 81.62 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 12 |
| 198 | 81.62 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 8 | 12 |
| 202 | 81.62 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 16 |
| 244 | 81.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 252 | 81.72 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 256 | 81.72 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 23 | NA |
| 261 | 81.73 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 265 | 81.73 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 12 |
| 270 | 81.74 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 288 | 81.77 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 303 | 81.80 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 314 | 81.81 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 6 |
| 333 | 81.83 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 9 | 6 |
| 347 | 81.84 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 352 | 81.85 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 411 | 81.91 | temperature | 20.0 | 270 | > th | dose independent | sin | 5 | NA |
| 412 | 81.91 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 23 | NA |
| 413 | 81.91 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 23 | NA |
| 428 | 81.93 | temperature | 20.0 | 270 | < th | dose independent | sin | 6 | NA |
| 430 | 81.93 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 443 | 81.94 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 13 | 19 |
| 461 | 81.96 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 463 | 81.96 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 475 | 81.97 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 486 | 81.98 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 504 | 82.01 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 514 | 82.02 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 7 |
| 541 | 82.04 | radiation | 30.0 | 10 | < th | dose independent | rect. | 16 | 19 |
| 550 | 82.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 23 |
| 557 | 82.06 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 565 | 82.06 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 570 | 82.07 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 608 | 82.10 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 635 | 82.12 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 11 |
| 643 | 82.13 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 648 | 82.14 | wind | 3.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 650 | 82.14 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 652 | 82.14 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 658 | 82.14 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 664 | 82.15 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 677 | 82.16 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 691 | 82.17 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 693 | 82.17 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 705 | 82.18 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 711 | 82.18 | temperature | 20.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 771 | 82.24 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 801 | 82.25 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 814 | 82.26 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 831 | 82.27 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 836 | 82.28 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 876 | 82.30 | temperature | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 901 | 82.32 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 930 | 82.34 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 16 | 6 |
| 943 | 82.35 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 995 | 82.37 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 16 | 22 |