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Os08g0133600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.19 (0.0235) R2 : 0.511
β1 : 0.861 (0.086) R2dD : 0.112 R2D : 0.0945
β2 : 1.19 (0.0604) R2dC : 0.415 R2C : 0.402
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0918 (0.0501) R2dN8 : 0.00483 R2N8 : -0.0068
σ : 0.441
deviance : 88.87
__
_____
C
peak time of C : 16.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.36 0.416 9.21 0.681 1.21 0.646 0.835 0.383 -0.0238 16.4 20.18 1131 -- --
78.5 0.413 9.23 0.646 1.21 0.579 0.743 -- -0.0531 16.3 20.49 1140 -- --
79.99 0.417 9.22 0.652 1.22 0.623 -- 0.193 -0.035 16.3 20.4 1134 -- --
80.07 0.417 9.22 0.623 1.22 0.588 -- -- -0.036 16.3 20.42 1059 -- --
142.05 0.555 9.2 0.626 -- 0.884 -- 0.657 -0.0732 -- 19.9 204 -- --
86.6 0.436 9.19 0.854 1.18 -- 0.921 -- 0.0869 16.5 -- -- -- --
88.87 0.441 9.19 0.861 1.19 -- -- -- 0.0918 16.5 -- -- -- --
115.83 0.501 9.24 0.613 -- 0.761 -- -- -0.182 -- 25.89 216 -- --
88.73 0.439 9.24 -- 1.18 0.903 -- -- -0.11 16.4 20.1 1274 -- --
163.98 0.598 9.18 0.814 -- -- -- -- 0.0606 -- -- -- -- --
108.39 0.487 9.21 -- 1.17 -- -- -- -0.00405 16.5 -- -- -- --
125.03 0.521 9.25 -- -- 0.824 -- -- -0.245 -- 26.22 209 -- --
181.48 0.629 9.2 -- -- -- -- -- -0.0298 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.77 temperature 10.0 90 > th dose dependent rect. 8 19
2 69.32 temperature 20.0 270 > th dose independent rect. 6 20
3 69.54 temperature 10.0 10 > th dose dependent rect. 9 19
9 70.00 temperature 20.0 270 > th dose independent rect. 19 16
17 70.67 temperature 20.0 90 > th dose independent rect. 8 19
22 70.97 wind 5.0 270 < th dose independent rect. 3 2
32 71.24 temperature 30.0 270 < th dose dependent rect. 3 2
35 71.33 precipitation 0.1 270 < th dose independent rect. 3 2
36 71.33 precipitation 0.1 270 < th dose dependent rect. 3 2
43 71.43 wind 5.0 270 < th dose independent rect. 2 4
48 71.61 temperature 10.0 270 > th dose dependent rect. 6 7
49 71.63 temperature 20.0 10 > th dose independent rect. 9 19
52 71.71 atmosphere 1000.0 90 > th dose dependent rect. 3 5
55 71.75 temperature 10.0 270 > th dose dependent rect. 20 15
58 71.82 temperature 30.0 90 < th dose dependent rect. 3 16
59 71.86 precipitation 0.1 90 < th dose independent rect. 3 5
61 71.86 precipitation 0.1 90 < th dose dependent rect. 3 5
71 72.21 wind 9.0 270 < th dose independent rect. 5 22
72 72.22 temperature 30.0 90 < th dose dependent rect. 3 5
73 72.23 wind 9.0 90 < th dose independent rect. 8 19
87 72.43 radiation 1.0 270 < th dose dependent rect. 3 2
92 72.48 temperature 10.0 90 > th dose dependent rect. 8 6
94 72.49 temperature 10.0 270 > th dose independent rect. 3 2
96 72.49 temperature 30.0 270 < th dose independent rect. 3 2
97 72.49 humidity 50.0 270 > th dose independent rect. 3 2
100 72.49 atmosphere 995.0 270 > th dose independent rect. 3 2
101 72.49 atmosphere 1010.0 270 < th dose independent rect. 3 2
103 72.49 radiation 20.0 270 < th dose independent rect. 3 2
107 72.49 temperature 10.0 270 > th dose independent rect. 5 22
108 72.50 radiation 40.0 270 < th dose dependent rect. 3 2
113 72.52 precipitation 0.1 90 < th dose independent rect. 8 19
115 72.52 precipitation 0.1 90 < th dose dependent rect. 8 19
117 72.54 temperature 10.0 90 > th dose independent rect. 3 5
119 72.54 temperature 30.0 90 < th dose independent rect. 3 5
120 72.54 humidity 50.0 90 > th dose independent rect. 3 5
122 72.54 atmosphere 995.0 90 > th dose independent rect. 3 5
123 72.54 atmosphere 1005.0 90 > th dose independent rect. 3 5
124 72.54 atmosphere 1015.0 90 < th dose independent rect. 3 5
127 72.56 wind 9.0 270 < th dose dependent rect. 3 2
130 72.57 radiation 1.0 270 < th dose independent rect. 3 2
135 72.63 radiation 40.0 90 < th dose independent rect. 3 5
140 72.65 temperature 15.0 270 > th dose dependent rect. 9 1
141 72.65 atmosphere 1000.0 270 > th dose dependent rect. 3 2
145 72.70 temperature 10.0 270 > th dose dependent rect. 7 4
151 72.74 temperature 20.0 270 > th dose independent rect. 18 8
161 72.82 atmosphere 1005.0 270 > th dose independent rect. 3 2
165 72.84 wind 9.0 270 < th dose dependent rect. 6 7
166 72.87 wind 9.0 90 < th dose dependent rect. 3 5
171 72.90 wind 1.0 270 > th dose independent rect. 2 4
176 72.93 wind 9.0 270 < th dose independent rect. 6 20
196 73.06 temperature 10.0 10 > th dose dependent rect. 9 5
200 73.08 atmosphere 1000.0 10 > th dose dependent rect. 3 6
234 73.25 wind 9.0 10 < th dose independent rect. 9 19
237 73.26 temperature 20.0 270 > th dose independent rect. 6 7
239 73.27 radiation 40.0 270 < th dose dependent rect. 2 4
241 73.28 precipitation 0.1 10 < th dose independent rect. 4 5
242 73.28 precipitation 0.1 10 < th dose dependent rect. 4 5
257 73.33 precipitation 0.1 270 < th dose independent rect. 2 15
258 73.33 radiation 40.0 90 < th dose independent rect. 3 16
262 73.33 precipitation 0.1 270 < th dose dependent rect. 2 15
263 73.34 wind 1.0 270 > th dose independent rect. 3 1
300 73.48 temperature 10.0 10 > th dose independent rect. 4 5
302 73.48 temperature 30.0 10 < th dose independent rect. 4 5
303 73.48 humidity 50.0 10 > th dose independent rect. 4 5
305 73.48 atmosphere 995.0 10 > th dose independent rect. 4 5
306 73.48 atmosphere 1015.0 10 < th dose independent rect. 4 5
308 73.48 temperature 10.0 10 > th dose independent rect. 9 19
342 73.57 atmosphere 995.0 90 > th dose independent rect. 8 19
345 73.60 wind 9.0 10 < th dose dependent rect. 4 5
362 73.67 temperature 10.0 43200 > th dose independent rect. 10 5
363 73.67 precipitation 0.1 270 < th dose independent rect. 6 20
368 73.67 precipitation 0.1 270 < th dose dependent rect. 6 20
451 73.81 radiation 40.0 10 < th dose independent rect. 4 16
452 73.81 atmosphere 1015.0 90 < th dose independent rect. 8 19
457 73.82 precipitation 0.1 270 < th dose independent rect. 5 22
460 73.82 precipitation 0.1 270 < th dose dependent rect. 5 22
496 73.90 wind 7.0 270 < th dose independent rect. 6 7
513 73.95 precipitation 0.1 270 < th dose independent rect. 14 16
514 73.95 wind 1.0 270 > th dose independent rect. 13 17
516 73.95 precipitation 0.1 270 < th dose dependent rect. 14 16
523 73.97 radiation 10.0 270 < th dose independent rect. 1 6
540 74.01 radiation 40.0 90 < th dose dependent rect. 3 6
555 74.06 wind 9.0 270 < th dose dependent rect. 7 4
595 74.12 temperature 10.0 270 > th dose independent rect. 17 9
596 74.12 radiation 20.0 270 < th dose independent rect. 17 9
599 74.12 temperature 10.0 270 > th dose independent rect. 2 15
600 74.12 atmosphere 1015.0 270 < th dose independent rect. 2 15
613 74.16 wind 9.0 270 < th dose independent rect. 17 9
636 74.24 atmosphere 995.0 10 > th dose independent rect. 9 19
662 74.28 radiation 40.0 270 < th dose dependent rect. 17 9
679 74.31 radiation 40.0 90 < th dose dependent rect. 3 16
681 74.31 wind 9.0 90 < th dose dependent rect. 8 19
690 74.33 precipitation 0.1 270 < th dose independent rect. 6 8
694 74.33 precipitation 0.1 270 < th dose dependent rect. 6 8
700 74.34 humidity 50.0 270 > th dose independent rect. 6 7
723 74.36 atmosphere 995.0 270 > th dose independent rect. 6 7
724 74.36 atmosphere 1015.0 270 < th dose independent rect. 6 7
725 74.36 temperature 10.0 270 > th dose independent rect. 13 17
732 74.38 temperature 15.0 90 > th dose independent rect. 8 7
752 74.43 radiation 40.0 270 < th dose independent rect. 13 17
757 74.45 wind 5.0 270 < th dose independent rect. 8 2
759 74.45 humidity 50.0 270 > th dose dependent rect. 3 2
784 74.49 wind 7.0 270 < th dose independent rect. 14 16
787 74.49 radiation 40.0 270 < th dose independent rect. 11 19
811 74.54 humidity 50.0 270 > th dose independent rect. 17 9
814 74.54 humidity 50.0 90 > th dose dependent rect. 19 8
837 74.57 temperature 30.0 90 < th dose dependent rect. 3 8
849 74.58 precipitation 0.1 270 < th dose independent rect. 17 9
852 74.58 temperature 10.0 270 > th dose dependent rect. 18 8
853 74.58 precipitation 0.1 270 < th dose dependent rect. 17 9
859 74.60 wind 9.0 270 < th dose independent rect. 2 15
888 74.65 precipitation 0.1 90 < th dose independent rect. 8 7
889 74.65 wind 9.0 270 < th dose dependent rect. 8 2
890 74.65 precipitation 0.1 90 < th dose dependent rect. 8 7
908 74.71 wind 5.0 270 < th dose independent rect. 7 4
913 74.71 atmosphere 1015.0 10 < th dose independent rect. 9 19
914 74.71 wind 1.0 270 > th dose independent rect. 11 20
916 74.72 atmosphere 995.0 270 > th dose independent rect. 17 9
942 74.76 wind 9.0 90 < th dose independent rect. 8 7
943 74.76 atmosphere 995.0 270 > th dose independent rect. 2 15
948 74.76 humidity 90.0 720 < th dose dependent rect. 19 12