Os08g0132600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0132600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.96 | 0.235 | 11 | -1.2 | 0.594 | -1.1 | -0.153 | 0.552 | -0.202 | 19 | 30.92 | 1601 | -- | -- |
| 25.23 | 0.234 | 11 | -1.09 | 0.6 | -1.11 | -0.211 | -- | -0.176 | 19.1 | 29.8 | 1605 | -- | -- |
| 25.02 | 0.233 | 11 | -1.2 | 0.591 | -1.1 | -- | 0.56 | -0.202 | 19 | 31.02 | 1610 | -- | -- |
| 25.25 | 0.234 | 11 | -1.08 | 0.601 | -1.12 | -- | -- | -0.185 | 19 | 29.66 | 1575 | -- | -- |
| 29.2 | 0.252 | 11 | -1.21 | -- | -1.53 | -- | 0.787 | -0.205 | -- | 57.22 | 543 | -- | -- |
| 45.57 | 0.316 | 11 | -0.721 | 0.603 | -- | -0.115 | -- | 0.0619 | 19.1 | -- | -- | -- | -- |
| 45.61 | 0.316 | 11 | -0.719 | 0.603 | -- | -- | -- | 0.0617 | 19.1 | -- | -- | -- | -- |
| 29.65 | 0.254 | 11 | -1.07 | -- | -1.51 | -- | -- | -0.168 | -- | 66.5 | 543 | -- | -- |
| 50.17 | 0.332 | 11 | -- | 0.58 | -0.853 | -- | -- | 0.0291 | 20.7 | 32.83 | 669 | -- | -- |
| 64.75 | 0.376 | 11 | -0.73 | -- | -- | -- | -- | 0.0509 | -- | -- | -- | -- | -- |
| 59.22 | 0.36 | 11 | -- | 0.611 | -- | -- | -- | 0.142 | 19 | -- | -- | -- | -- |
| 57.36 | 0.353 | 11 | -- | -- | -1.13 | -- | -- | -0.014 | -- | 33.08 | 485 | -- | -- |
| 78.82 | 0.414 | 10.9 | -- | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.15 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 5 | 24.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 22 | 24.27 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 69 | 24.36 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 123 | 24.47 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 140 | 24.50 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 141 | 24.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 146 | 24.51 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 147 | 24.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 181 | 24.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 4 |
| 226 | 24.60 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 279 | 24.68 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 288 | 24.69 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 352 | 24.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 375 | 24.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 411 | 24.82 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 428 | 24.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 718 | 25.07 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 749 | 25.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 774 | 25.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 810 | 25.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 849 | 25.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 850 | 25.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 867 | 25.16 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |