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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0132400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.82 (0.0122) R2 : 0.0988
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.181 (0.0256) R2dN8 : 0.128 R2N8 : 0.0988
σ : 0.229
deviance : 24.05
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.14 0.226 2.82 -0.015 0.11 -0.0684 -0.0697 0.274 0.179 11.3 71.9 45 -- --
23.34 0.225 2.82 -0.0277 0.106 -0.0722 0.0668 -- 0.173 11.1 69 45 -- --
23.16 0.224 2.82 -0.0177 0.111 -0.0703 -- 0.239 0.18 11.4 71.1 44 -- --
23.33 0.225 2.82 -0.0311 0.104 -0.0812 -- -- 0.174 11.2 67.57 41 -- --
23.73 0.227 2.82 -0.0251 -- -0.0211 -- 0.225 0.178 -- 72.01 40 -- --
23.64 0.228 2.82 -0.033 0.0793 -- 0.0475 -- 0.177 9.87 -- -- -- --
23.65 0.228 2.82 -0.0315 0.0798 -- -- -- 0.177 9.58 -- -- -- --
23.91 0.228 2.82 -0.0329 -- -0.0414 -- -- 0.175 -- 67.14 43 -- --
23.36 0.225 2.82 -- 0.105 -0.0812 -- -- 0.178 11.3 68 41 -- --
24.02 0.229 2.82 -0.0321 -- -- -- -- 0.177 -- -- -- -- --
23.67 0.228 2.82 -- 0.0798 -- -- -- 0.181 9.61 -- -- -- --
23.93 0.228 2.82 -- -- -0.0444 -- -- 0.178 -- 66.87 39 -- --
24.05 0.229 2.82 -- -- -- -- -- 0.181 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.34 wind 5.0 10 > th dose independent rect. 10 1
5 22.34 wind 5.0 10 > th dose dependent rect. 10 1
9 22.35 wind 7.0 90 > th dose dependent rect. 8 1
10 22.37 wind 7.0 90 > th dose independent rect. 8 1
11 22.37 humidity 90.0 90 > th dose independent rect. 8 1
16 22.41 humidity 90.0 90 > th dose dependent rect. 8 1
19 22.46 wind 9.0 90 > th dose dependent rect. 22 12
28 22.52 wind 7.0 90 > th dose independent rect. 4 5
80 22.77 wind 7.0 720 < th dose independent rect. 23 8
98 22.82 precipitation 0.1 720 < th dose independent rect. 23 8
102 22.82 precipitation 0.1 720 < th dose dependent rect. 23 8
104 22.85 humidity 50.0 720 > th dose independent rect. 21 16
112 22.87 temperature 25.0 10 > th dose independent rect. 8 2
119 22.89 radiation 20.0 90 > th dose independent rect. 10 1
120 22.89 temperature 10.0 720 > th dose independent rect. 1 8
121 22.89 humidity 50.0 720 > th dose independent rect. 1 8
122 22.89 atmosphere 995.0 720 > th dose independent rect. 1 8
123 22.89 wind 7.0 90 > th dose independent rect. 23 11
124 22.89 temperature 10.0 720 > th dose independent rect. 9 16
128 22.89 wind 9.0 720 < th dose dependent rect. 23 8
131 22.90 wind 3.0 720 < th dose independent rect. 23 8
132 22.90 temperature 10.0 720 > th dose independent rect. 13 8
134 22.90 wind 3.0 720 > th dose independent rect. 22 10
136 22.90 temperature 10.0 720 > th dose independent rect. 21 16
137 22.90 atmosphere 995.0 720 > th dose independent rect. 21 16
139 22.91 humidity 80.0 90 < th dose independent rect. 10 1
141 22.91 wind 9.0 720 < th dose independent rect. 1 8
142 22.91 temperature 30.0 720 < th dose independent rect. 1 8
145 22.91 atmosphere 995.0 720 > th dose independent rect. 9 16
147 22.92 atmosphere 995.0 720 > th dose independent rect. 13 8
151 22.92 temperature 15.0 90 > th dose dependent rect. 10 1
153 22.93 wind 1.0 720 > th dose independent rect. 13 8
156 22.93 atmosphere 1005.0 10 < th dose dependent rect. 5 1
159 22.94 temperature 20.0 90 > th dose independent rect. 10 1
164 22.95 wind 3.0 720 > th dose independent rect. 1 5
177 22.96 precipitation 0.1 720 < th dose independent rect. 19 16
183 22.96 wind 1.0 720 > th dose dependent rect. 1 5
186 22.96 precipitation 0.1 720 < th dose dependent rect. 19 16
189 22.97 wind 3.0 720 < th dose independent rect. 2 5
195 22.97 radiation 1.0 30 > th dose independent rect. 9 23
198 22.97 wind 1.0 720 > th dose dependent rect. 1 8
199 22.97 wind 1.0 720 > th dose dependent rect. 22 11
220 22.99 humidity 70.0 30 < th dose independent rect. 14 22
221 22.99 humidity 90.0 90 < th dose dependent rect. 10 1
236 23.00 wind 1.0 720 > th dose dependent rect. 2 1
242 23.01 wind 3.0 720 > th dose independent sin 10 NA
243 23.01 wind 3.0 720 > th dose independent rect. 2 1
271 23.02 precipitation 0.1 720 < th dose independent rect. 13 8
273 23.02 wind 9.0 720 < th dose independent rect. 19 16
275 23.02 wind 3.0 10 < th dose dependent rect. 10 3
276 23.02 precipitation 0.1 720 < th dose dependent rect. 13 8
280 23.03 wind 3.0 720 < th dose independent sin 8 NA
283 23.03 temperature 10.0 720 > th dose independent rect. 23 8
284 23.03 temperature 30.0 720 < th dose independent rect. 23 8
285 23.03 humidity 50.0 720 > th dose independent rect. 23 8
287 23.03 atmosphere 995.0 720 > th dose independent rect. 23 8
288 23.03 radiation 40.0 720 < th dose independent rect. 23 8
290 23.03 wind 3.0 720 > th dose independent rect. 17 16
291 23.03 temperature 10.0 720 > th dose independent rect. 7 16
292 23.03 precipitation 0.1 720 < th dose independent rect. 9 16
293 23.03 radiation 40.0 90 > th dose independent rect. 14 21
298 23.03 wind 5.0 720 < th dose dependent rect. 2 5
304 23.03 wind 1.0 720 > th dose dependent rect. 22 8
308 23.03 precipitation 0.1 720 < th dose dependent rect. 9 16
311 23.04 radiation 20.0 90 < th dose independent rect. 8 1
317 23.04 atmosphere 995.0 720 > th dose independent rect. 7 16
319 23.04 wind 9.0 90 < th dose dependent rect. 10 1
331 23.05 wind 7.0 90 < th dose independent rect. 10 1
332 23.05 atmosphere 1010.0 90 < th dose independent rect. 10 1
367 23.06 humidity 70.0 10 < th dose independent rect. 10 2
372 23.06 temperature 10.0 720 > th dose independent rect. 11 8
373 23.06 atmosphere 1015.0 720 < th dose independent rect. 11 8
380 23.06 temperature 10.0 720 > th dose independent rect. 19 16
381 23.06 atmosphere 995.0 720 > th dose independent rect. 19 16
383 23.06 humidity 70.0 30 < th dose independent rect. 16 20
392 23.07 radiation 10.0 30 > th dose independent rect. 8 1
393 23.07 precipitation 0.1 270 > th dose independent rect. 2 1
394 23.07 wind 3.0 10 < th dose independent rect. 10 3
399 23.07 atmosphere 995.0 720 > th dose independent rect. 11 8
409 23.07 precipitation 0.1 270 > th dose dependent rect. 2 1
411 23.07 temperature 20.0 10 > th dose dependent rect. 10 2
426 23.08 wind 5.0 30 < th dose independent rect. 8 1
430 23.08 temperature 10.0 30 > th dose independent rect. 8 1
434 23.08 temperature 10.0 1440 > th dose independent rect. 9 1
437 23.08 temperature 30.0 30 < th dose independent rect. 8 1
438 23.08 humidity 50.0 30 > th dose independent rect. 8 1
441 23.08 humidity 80.0 30 < th dose independent rect. 8 1
443 23.08 atmosphere 995.0 30 > th dose independent rect. 8 1
446 23.08 atmosphere 995.0 1440 > th dose independent rect. 9 1
449 23.08 atmosphere 1010.0 30 < th dose independent rect. 8 1
451 23.08 atmosphere 1015.0 1440 < th dose independent rect. 9 1
458 23.08 precipitation 0.1 30 < th dose independent rect. 8 1
464 23.08 humidity 70.0 10 < th dose independent rect. 8 4
472 23.08 humidity 70.0 30 > th dose independent rect. 8 22
475 23.08 temperature 10.0 30 > th dose independent rect. 9 23
476 23.08 temperature 10.0 1440 > th dose independent rect. 10 23
479 23.08 wind 1.0 720 > th dose dependent rect. 4 1
481 23.08 temperature 20.0 10 > th dose dependent rect. 8 1
483 23.08 temperature 10.0 30 > th dose dependent rect. 8 1
487 23.08 humidity 90.0 30 < th dose dependent rect. 8 1
488 23.08 atmosphere 995.0 30 > th dose dependent rect. 8 1
491 23.08 radiation 1.0 30 > th dose dependent rect. 8 1
493 23.08 radiation 1.0 90 > th dose dependent rect. 10 1
494 23.08 precipitation 0.1 30 < th dose dependent rect. 8 1
509 23.09 temperature 20.0 10 > th dose independent rect. 10 2
522 23.09 wind 5.0 30 < th dose dependent rect. 8 1
527 23.09 humidity 50.0 30 > th dose dependent rect. 8 1
532 23.09 radiation 40.0 30 < th dose dependent rect. 8 1
549 23.10 temperature 20.0 90 > th dose independent rect. 4 1
550 23.10 humidity 90.0 270 > th dose independent rect. 5 1
553 23.10 radiation 1.0 1440 > th dose independent rect. 11 1
583 23.10 atmosphere 1000.0 30 > th dose independent rect. 9 23
590 23.10 atmosphere 1015.0 30 < th dose dependent rect. 8 1
633 23.11 radiation 40.0 720 < th dose independent rect. 1 8
649 23.11 humidity 70.0 90 > th dose independent rect. 17 20
653 23.11 wind 1.0 720 > th dose dependent sin 9 NA
654 23.11 wind 5.0 720 < th dose dependent sin 7 NA
700 23.12 temperature 30.0 10 < th dose independent rect. 9 23
701 23.12 humidity 70.0 30 > th dose independent rect. 1 23
705 23.12 temperature 30.0 30 < th dose dependent rect. 8 1
729 23.13 atmosphere 1005.0 10 > th dose independent rect. 10 1
731 23.13 precipitation 0.1 90 < th dose independent rect. 10 1
732 23.13 temperature 20.0 10 > th dose independent rect. 4 2
737 23.13 precipitation 0.1 720 < th dose independent rect. 11 8
746 23.13 humidity 70.0 10 > th dose independent rect. 18 19
760 23.13 precipitation 0.1 90 < th dose dependent rect. 10 1
771 23.13 precipitation 0.1 720 < th dose dependent rect. 11 8
776 23.13 wind 1.0 720 > th dose dependent rect. 18 15
785 23.14 atmosphere 995.0 90 > th dose independent rect. 10 1
788 23.14 radiation 1.0 270 < th dose independent rect. 5 1
797 23.14 temperature 30.0 10 < th dose independent rect. 10 8
800 23.14 humidity 70.0 10 > th dose independent rect. 4 9
823 23.14 humidity 70.0 90 > th dose independent rect. 15 22
824 23.14 temperature 10.0 90 > th dose independent rect. 11 23
826 23.14 atmosphere 995.0 90 > th dose independent rect. 11 23
827 23.14 precipitation 0.1 90 < th dose independent rect. 11 23
844 23.14 wind 5.0 720 < th dose dependent rect. 5 2
866 23.14 radiation 30.0 90 > th dose dependent rect. 14 21
867 23.14 precipitation 0.1 90 < th dose dependent rect. 11 23
869 23.15 humidity 70.0 30 < th dose independent sin 1 NA
872 23.15 wind 1.0 90 > th dose independent rect. 10 1
875 23.15 temperature 10.0 1440 > th dose independent rect. 11 1
879 23.15 temperature 25.0 270 < th dose independent rect. 5 1
880 23.15 temperature 30.0 90 < th dose independent rect. 10 1
883 23.15 atmosphere 995.0 1440 > th dose independent rect. 11 1
888 23.15 precipitation 0.1 1440 < th dose independent rect. 11 1
904 23.15 humidity 50.0 720 > th dose independent rect. 19 16
911 23.15 temperature 10.0 1440 > th dose independent rect. 12 23
922 23.15 humidity 70.0 10 < th dose dependent rect. 10 1
927 23.15 atmosphere 1005.0 10 > th dose dependent rect. 10 1
933 23.15 precipitation 0.1 1440 < th dose dependent rect. 11 1
977 23.16 humidity 50.0 30 > th dose independent rect. 10 1
989 23.16 radiation 40.0 30 < th dose independent rect. 10 1