Os08g0131100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450.
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Os08g0131100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 230.06 | 0.713 | 5.33 | 1.63 | 3.04 | 1.07 | -0.962 | 0.402 | 0.137 | 19 | 19.98 | 51 | -- | -- |
| 230.81 | 0.708 | 5.32 | 1.69 | 3.04 | 1.03 | -0.994 | -- | 0.148 | 19 | 19.96 | 48 | -- | -- |
| 232.46 | 0.71 | 5.33 | 1.64 | 3.04 | 1.08 | -- | 0.465 | 0.135 | 19 | 19.94 | 54 | -- | -- |
| 233.31 | 0.711 | 5.32 | 1.7 | 3.03 | 1.04 | -- | -- | 0.15 | 19 | 19.97 | 45 | -- | -- |
| 714.19 | 1.24 | 5.25 | 1.59 | -- | 1.04 | -- | 0.0681 | 0.13 | -- | 20.4 | 30 | -- | -- |
| 269.68 | 0.77 | 5.36 | 1.4 | 3.02 | -- | -1.11 | -- | -0.0287 | 19.3 | -- | -- | -- | -- |
| 272.96 | 0.774 | 5.36 | 1.43 | 3.02 | -- | -- | -- | -0.0314 | 19.3 | -- | -- | -- | -- |
| 713.92 | 1.24 | 5.25 | 1.63 | -- | 0.979 | -- | -- | 0.0989 | -- | 20.36 | 30 | -- | -- |
| 307.94 | 0.817 | 5.33 | -- | 3.08 | 0.735 | -- | -- | 0.0146 | 19.1 | 20.4 | 122 | -- | -- |
| 756.58 | 1.29 | 5.29 | 1.38 | -- | -- | -- | -- | -0.082 | -- | -- | -- | -- | -- |
| 326.61 | 0.845 | 5.4 | -- | 3 | -- | -- | -- | -0.19 | 19.3 | -- | -- | -- | -- |
| 778.32 | 1.3 | 5.3 | -- | -- | 0.761 | -- | -- | -0.111 | -- | 20.5 | 13 | -- | -- |
| 806.47 | 1.33 | 5.33 | -- | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 3 | 219.11 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 10 |
| 4 | 219.83 | temperature | 10 | 90 | > th | dose dependent | sin | 10 | NA |
| 11 | 221.27 | temperature | 30 | 90 | < th | dose dependent | sin | 10 | NA |
| 14 | 221.76 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 8 |
| 19 | 221.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 38 | 222.98 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 17 |
| 43 | 223.36 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 15 |
| 110 | 225.39 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 19 |
| 129 | 226.05 | temperature | 20 | 30 | < th | dose independent | rect. | 13 | 21 |
| 143 | 226.27 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 22 |
| 152 | 226.39 | temperature | 20 | 30 | < th | dose independent | rect. | 13 | 19 |
| 186 | 226.87 | temperature | 20 | 30 | > th | dose independent | rect. | 15 | 23 |
| 196 | 227.10 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 19 |
| 224 | 227.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 15 |
| 230 | 227.64 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 276 | 228.11 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 281 | 228.17 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 23 |
| 319 | 228.60 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 12 |
| 331 | 228.68 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 332 | 228.68 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 15 |
| 338 | 228.73 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 13 |
| 368 | 228.90 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 21 |
| 404 | 229.14 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 23 |
| 410 | 229.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 433 | 229.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 499 | 229.81 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 9 |
| 507 | 229.89 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 15 |
| 571 | 230.34 | temperature | 20 | 90 | > th | dose independent | sin | 10 | NA |
| 572 | 230.35 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 23 |
| 607 | 230.56 | temperature | 20 | 30 | < th | dose independent | rect. | 5 | 23 |
| 619 | 230.63 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 23 |
| 622 | 230.65 | temperature | 20 | 30 | < th | dose independent | rect. | 9 | 23 |
| 626 | 230.68 | temperature | 20 | 30 | < th | dose independent | no | NA | NA |
| 627 | 230.68 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 23 |
| 630 | 230.71 | temperature | 20 | 30 | < th | dose independent | rect. | 1 | 23 |
| 633 | 230.73 | temperature | 20 | 30 | > th | dose independent | no | NA | NA |
| 634 | 230.74 | temperature | 20 | 30 | < th | dose independent | rect. | 15 | 23 |
| 636 | 230.76 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 23 |
| 675 | 231.01 | temperature | 15 | 720 | > th | dose dependent | sin | 16 | NA |
| 972 | 232.27 | temperature | 20 | 30 | > th | dose independent | rect. | 1 | 23 |
| 984 | 232.33 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 22 |