FiT-DB / Search/ Help/ Sample detail

Os08g0130600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BTB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.64 (0.0246) R2 : 0.522
β1 : 1.97 (0.0902) R2dD : 0.518 R2D : 0.414
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.462 (0.0526) R2dN8 : 0.108 R2N8 : 0.00464
σ : 0.462
deviance : 97.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.3 0.402 7.66 2.17 0.442 0.4 0.487 2.88 0.443 11.6 38.4 4805 -- --
83.22 0.425 7.63 2.12 0.422 0.3 0.515 -- 0.438 11.5 36.95 12161 -- --
74.3 0.401 7.66 2.19 0.44 0.378 -- 3 0.446 11.7 38.39 4732 -- --
84.03 0.427 7.65 2.06 0.445 0.307 -- -- 0.367 11.8 33.11 12180 -- --
86.31 0.433 7.66 2.18 -- 0.424 -- 2.8 0.442 -- 37.98 4694 -- --
85.44 0.433 7.63 1.96 0.422 -- 0.547 -- 0.465 11.8 -- -- -- --
86.74 0.436 7.63 1.98 0.42 -- -- -- 0.467 11.8 -- -- -- --
95.11 0.454 7.66 2.05 -- 0.294 -- -- 0.382 -- 29.96 12004 -- --
86.6 0.433 7.77 -- 0.442 -1.71 -- -- -0.17 11.8 57.13 47520 -- --
97.83 0.462 7.64 1.97 -- -- -- -- 0.462 -- -- -- -- --
190.07 0.645 7.68 -- 0.397 -- -- -- 0.247 11.5 -- -- -- --
98.89 0.463 7.78 -- -- -1.69 -- -- -0.169 -- 57.11 47520 -- --
199.96 0.66 7.69 -- -- -- -- -- 0.244 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.08 temperature 30.0 30 < th dose independent rect. 8 21
4 69.27 temperature 30.0 270 < th dose independent rect. 7 8
9 69.94 temperature 30.0 270 < th dose independent rect. 6 22
33 71.49 temperature 30.0 30 < th dose independent rect. 11 18
42 71.87 radiation 1.0 10 < th dose dependent sin 11 NA
46 72.06 temperature 10.0 30 > th dose dependent rect. 5 16
54 72.29 wind 7.0 43200 < th dose independent rect. 5 4
58 72.47 radiation 30.0 10 < th dose independent rect. 5 14
60 72.52 atmosphere 1000.0 90 > th dose independent rect. 19 9
62 72.54 radiation 10.0 270 < th dose dependent rect. 15 12
63 72.55 temperature 15.0 90 > th dose independent rect. 19 9
65 72.56 radiation 20.0 1440 > th dose dependent rect. 16 15
68 72.62 radiation 20.0 1440 > th dose dependent rect. 16 1
83 72.66 wind 7.0 43200 > th dose independent rect. 5 4
85 72.67 radiation 1.0 270 < th dose independent rect. 17 10
96 72.77 precipitation 0.1 90 < th dose independent rect. 4 15
98 72.77 precipitation 0.1 90 < th dose dependent rect. 4 15
112 72.89 wind 9.0 90 < th dose independent rect. 19 9
114 72.90 humidity 70.0 90 > th dose independent rect. 19 9
117 72.93 temperature 30.0 90 < th dose independent rect. 19 9
118 72.93 humidity 50.0 90 > th dose independent rect. 19 9
121 72.93 radiation 1.0 90 < th dose independent rect. 19 9
126 72.93 temperature 10.0 90 > th dose independent rect. 4 15
127 72.93 atmosphere 1015.0 90 < th dose independent rect. 4 15
128 72.93 radiation 1.0 90 < th dose dependent rect. 19 9
139 73.02 radiation 30.0 4320 < th dose independent rect. 14 19
143 73.07 humidity 80.0 43200 > th dose dependent rect. 3 8
144 73.08 atmosphere 1015.0 10 < th dose dependent rect. 5 3
146 73.11 temperature 15.0 10 > th dose independent rect. 8 21
147 73.11 atmosphere 1015.0 90 < th dose dependent rect. 5 2
150 73.14 radiation 40.0 4320 < th dose independent sin 12 NA
156 73.18 radiation 30.0 30 < th dose dependent rect. 5 4
157 73.20 temperature 30.0 270 < th dose independent rect. 22 15
160 73.21 humidity 70.0 43200 > th dose dependent rect. 4 10
161 73.22 humidity 60.0 30 > th dose dependent rect. 5 3
167 73.24 humidity 80.0 43200 > th dose dependent rect. 2 10
174 73.26 radiation 30.0 4320 > th dose dependent rect. 14 19
175 73.27 wind 7.0 43200 < th dose independent rect. 6 2
181 73.28 temperature 20.0 270 > th dose independent rect. 4 2
186 73.29 humidity 80.0 270 > th dose dependent rect. 4 2
196 73.32 humidity 90.0 43200 > th dose independent rect. 10 2
198 73.33 precipitation 0.1 90 < th dose independent rect. 19 9
200 73.33 precipitation 0.1 90 < th dose dependent rect. 19 9
203 73.34 atmosphere 1000.0 10 > th dose independent rect. 8 21
204 73.34 atmosphere 1015.0 90 < th dose dependent rect. 4 5
212 73.39 radiation 1.0 10 < th dose independent sin 11 NA
230 73.46 precipitation 0.1 43200 < th dose independent rect. 6 1
232 73.46 precipitation 0.1 43200 < th dose dependent rect. 6 1
235 73.49 wind 5.0 43200 > th dose dependent rect. 5 3
242 73.51 radiation 10.0 270 < th dose dependent rect. 11 16
252 73.55 radiation 30.0 4320 > th dose dependent sin 12 NA
259 73.57 humidity 70.0 10 > th dose independent rect. 19 10
262 73.57 wind 9.0 90 < th dose dependent rect. 19 9
264 73.58 radiation 10.0 270 < th dose independent rect. 4 2
265 73.59 radiation 30.0 30 < th dose independent rect. 5 3
268 73.62 humidity 70.0 30 > th dose independent rect. 5 3
269 73.62 radiation 30.0 4320 < th dose independent rect. 14 7
274 73.62 radiation 30.0 4320 < th dose independent rect. 14 15
280 73.63 radiation 30.0 4320 < th dose independent rect. 14 3
289 73.63 radiation 40.0 4320 > th dose dependent rect. 12 22
290 73.64 humidity 90.0 43200 < th dose independent rect. 3 6
302 73.66 wind 9.0 10 < th dose independent rect. 8 21
316 73.70 humidity 90.0 43200 < th dose independent rect. 10 3
318 73.70 humidity 80.0 43200 > th dose dependent sin 4 NA
320 73.71 temperature 15.0 270 > th dose independent rect. 6 21
327 73.72 humidity 70.0 43200 > th dose dependent sin 2 NA
332 73.74 radiation 1.0 10 > th dose independent sin 11 NA
338 73.75 humidity 50.0 90 > th dose dependent rect. 18 10
340 73.77 precipitation 0.1 270 < th dose independent rect. 14 17
343 73.77 precipitation 0.1 270 < th dose dependent rect. 14 17
348 73.79 wind 9.0 90 < th dose independent rect. 4 15
361 73.82 humidity 90.0 43200 < th dose independent rect. 1 14
362 73.82 radiation 40.0 4320 > th dose dependent sin 15 NA
367 73.82 humidity 70.0 43200 > th dose dependent rect. 2 18
368 73.83 temperature 15.0 270 > th dose independent rect. 7 7
387 73.84 radiation 10.0 270 < th dose dependent rect. 9 18
405 73.88 temperature 15.0 10 > th dose independent rect. 20 9
415 73.89 humidity 70.0 43200 > th dose dependent rect. 10 1
418 73.90 atmosphere 1000.0 10 > th dose independent rect. 20 9
433 73.93 wind 5.0 43200 > th dose dependent rect. 7 1
434 73.93 radiation 40.0 4320 > th dose dependent rect. 12 3
442 73.94 wind 9.0 270 < th dose independent rect. 7 7
444 73.94 radiation 30.0 4320 > th dose dependent rect. 14 3
485 73.97 wind 1.0 270 > th dose independent rect. 7 7
500 73.99 wind 9.0 270 < th dose independent rect. 6 22
503 74.00 humidity 90.0 43200 > th dose independent rect. 9 5
516 74.02 temperature 10.0 270 > th dose dependent rect. 4 2
522 74.03 humidity 90.0 43200 > th dose dependent rect. 10 1
545 74.05 radiation 40.0 10 < th dose dependent rect. 5 14
548 74.06 humidity 90.0 270 > th dose independent rect. 3 3
559 74.06 radiation 1.0 90 < th dose dependent rect. 7 21
567 74.08 atmosphere 1010.0 90 < th dose independent rect. 19 9
576 74.09 temperature 10.0 720 > th dose dependent rect. 4 11
578 74.09 radiation 40.0 4320 < th dose dependent rect. 15 17
580 74.10 temperature 15.0 43200 > th dose independent rect. 5 1
590 74.10 radiation 1.0 270 < th dose independent rect. 11 16
600 74.11 humidity 50.0 10 > th dose independent rect. 5 14
604 74.11 radiation 1.0 270 < th dose independent rect. 7 20
615 74.13 wind 7.0 10 < th dose independent rect. 5 3
617 74.13 temperature 10.0 10 > th dose independent rect. 5 3
619 74.13 temperature 30.0 10 < th dose independent rect. 5 3
620 74.13 humidity 50.0 10 > th dose independent rect. 5 3
622 74.13 atmosphere 995.0 10 > th dose independent rect. 5 3
623 74.13 atmosphere 1015.0 10 < th dose independent rect. 5 3
630 74.14 atmosphere 1010.0 10 < th dose independent rect. 20 9
632 74.14 temperature 30.0 270 < th dose independent rect. 17 22
638 74.14 radiation 40.0 4320 < th dose dependent rect. 14 19
644 74.15 radiation 40.0 1440 < th dose dependent rect. 1 5
651 74.16 atmosphere 995.0 90 > th dose independent rect. 4 15
694 74.19 precipitation 0.1 10 < th dose independent rect. 5 3
696 74.19 precipitation 0.1 270 < th dose independent rect. 7 7
705 74.19 precipitation 0.1 10 < th dose dependent rect. 5 3
708 74.19 precipitation 0.1 270 < th dose dependent rect. 7 7
735 74.21 atmosphere 1000.0 270 > th dose independent rect. 7 7
745 74.22 atmosphere 1015.0 270 < th dose independent rect. 7 7
748 74.22 temperature 10.0 270 > th dose independent rect. 14 17
749 74.22 radiation 10.0 270 < th dose dependent rect. 4 2
776 74.25 radiation 10.0 1440 < th dose independent sin 14 NA
783 74.26 precipitation 0.1 43200 > th dose independent rect. 6 1
786 74.26 precipitation 0.1 43200 > th dose dependent rect. 6 1
787 74.26 temperature 10.0 10 > th dose dependent rect. 5 3
790 74.26 radiation 40.0 1440 < th dose dependent rect. 18 12
794 74.27 humidity 90.0 43200 < th dose independent sin 5 NA
804 74.28 atmosphere 1010.0 270 < th dose independent rect. 4 2
825 74.29 radiation 40.0 4320 > th dose dependent no NA NA
833 74.29 radiation 40.0 4320 > th dose dependent rect. 7 8
979 74.30 precipitation 0.1 270 < th dose independent rect. 4 2
981 74.30 precipitation 0.1 270 < th dose dependent rect. 4 2
998 74.30 humidity 80.0 43200 > th dose dependent rect. 19 18