Os08g0129800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0129800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.75 | 0.307 | 15.1 | 0.599 | 0.727 | 0.834 | 0.433 | -1.05 | 0.0201 | 21 | 20.58 | 2934 | -- | -- |
| 45.06 | 0.313 | 15 | 0.747 | 0.719 | 1.02 | 0.463 | -- | 0.0659 | 20.9 | 20.2 | 4091 | -- | -- |
| 43.39 | 0.307 | 15.1 | 0.579 | 0.729 | 0.839 | -- | -1.07 | 0.018 | 20.9 | 20.58 | 2934 | -- | -- |
| 44.67 | 0.311 | 15 | 0.751 | 0.741 | 1.09 | -- | -- | 0.0819 | 20.9 | 19.6 | 2902 | -- | -- |
| 71.68 | 0.394 | 15 | 0.67 | -- | 0.94 | -- | -0.776 | 0.0434 | -- | 20.6 | 2293 | -- | -- |
| 65.45 | 0.379 | 15 | 1.35 | 0.722 | -- | 0.51 | -- | 0.338 | 21.1 | -- | -- | -- | -- |
| 66.36 | 0.381 | 15 | 1.33 | 0.721 | -- | -- | -- | 0.337 | 21.1 | -- | -- | -- | -- |
| 72.34 | 0.396 | 15 | 0.794 | -- | 1.13 | -- | -- | 0.0849 | -- | 19.6 | 2262 | -- | -- |
| 46.82 | 0.319 | 15.1 | -- | 0.714 | 1.39 | -- | -- | -0.088 | 20.9 | 18.6 | 21683 | -- | -- |
| 96.37 | 0.459 | 15 | 1.33 | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
| 113.03 | 0.497 | 15 | -- | 0.72 | -- | -- | -- | 0.189 | 21.3 | -- | -- | -- | -- |
| 75.6 | 0.405 | 15.1 | -- | -- | 1.4 | -- | -- | -0.0918 | -- | 18.68 | 21136 | -- | -- |
| 143.21 | 0.559 | 15 | -- | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.98 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 2 | 42.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 3 | 42.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 8 |
| 4 | 42.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 5 | 42.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 30 | 42.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 51 | 42.78 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 58 | 42.86 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 192 | 43.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 201 | 43.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 405 | 44.19 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 409 | 44.21 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 442 | 44.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 449 | 44.30 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 457 | 44.31 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 464 | 44.32 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 23 |
| 479 | 44.35 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 510 | 44.41 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 522 | 44.43 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 23 |
| 618 | 44.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 719 | 44.94 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 875 | 45.38 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 932 | 45.50 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 934 | 45.51 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 995 | 45.65 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 999 | 45.65 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |